Miyakogusa Predicted Gene
- Lj2g3v0808940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0808940.1 Non Chatacterized Hit- tr|J3LBP8|J3LBP8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G2,38.18,3e-18,seg,NULL; Ran BP2/NZF zinc finger-like,NULL;
ZF_RANBP2_1,Zinc finger, RanBP2-type; ZF_RANBP2_2,Zinc ,CUFF.35477.1
(1173 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72718 similar to UniRef100_A7PEM4 Cluster: Chromosome... 1483 0.0
gnl|LJGI|BW607503 similar to UniRef100_A7PEM4 Cluster: Chromosom... 815 0.0
gnl|LJGI|BP045911 254 1e-66
>gnl|LJGI|TC72718 similar to UniRef100_A7PEM4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 802
Score = 1483 bits (748), Expect = 0.0
Identities = 748/748 (100%)
Strand = Plus / Plus
Query: 1 atggcttcgtccagggacaaggattcagctccgtcacaccaccaccaaccaccgctcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atggcttcgtccagggacaaggattcagctccgtcacaccaccaccaaccaccgctcttg 114
Query: 61 agcagcctcgtcgtccgcccctcccacaccgagaccaccgccgccgctgattacgagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 agcagcctcgtcgtccgcccctcccacaccgagaccaccgccgccgctgattacgagtct 174
Query: 121 ggcgaactccaccgcgaccctcctcccccattttcccgctccgatcgatttcccgatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ggcgaactccaccgcgaccctcctcccccattttcccgctccgatcgatttcccgatgac 234
Query: 181 cctgggtatagaatccgtgcaggttcctcatctcctgttcaccgtagagatgcagatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cctgggtatagaatccgtgcaggttcctcatctcctgttcaccgtagagatgcagatcat 294
Query: 241 cgccttagttctgattacaatcacttgtcacgaagccgtggatatggaggggggagagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cgccttagttctgattacaatcacttgtcacgaagccgtggatatggaggggggagagat 354
Query: 301 cctggcagacatcgagacccttcacccccacatgctcgaggtagagtaggtggcaggcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cctggcagacatcgagacccttcacccccacatgctcgaggtagagtaggtggcaggcca 414
Query: 361 attggtagagcatttgatgggcctagcttcggtcctggacatgctagaggggaaggtaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 attggtagagcatttgatgggcctagcttcggtcctggacatgctagaggggaaggtaga 474
Query: 421 aataatcccaatgtgcgtcctagggagggagattggatttgtcctgatggcctatgtggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aataatcccaatgtgcgtcctagggagggagattggatttgtcctgatggcctatgtggt 534
Query: 481 aatctaaactttgcaaggcgggaccattgtaacagctgtaatagggctcgtccaactcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aatctaaactttgcaaggcgggaccattgtaacagctgtaatagggctcgtccaactcct 594
Query: 541 gctggaagtcctcgaagggcttatccttctcctccaccacttcatgctcctcaaagacga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gctggaagtcctcgaagggcttatccttctcctccaccacttcatgctcctcaaagacga 654
Query: 601 ttccctggtcctccattagaccattctccagaaaggtctatgaatggctataatagatct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttccctggtcctccattagaccattctccagaaaggtctatgaatggctataatagatct 714
Query: 661 cctcttcgtgggttaggaagggatggccctagagattacggatctgctgctgctttgcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 cctcttcgtgggttaggaagggatggccctagagattacggatctgctgctgctttgcca 774
Query: 721 cctctgaggcatgaaggtcggtttccag 748
||||||||||||||||||||||||||||
Sbjct: 775 cctctgaggcatgaaggtcggtttccag 802
>gnl|LJGI|BW607503 similar to UniRef100_A7PEM4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 488
Score = 815 bits (411), Expect = 0.0
Identities = 411/411 (100%)
Strand = Plus / Plus
Query: 1 atggcttcgtccagggacaaggattcagctccgtcacaccaccaccaaccaccgctcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atggcttcgtccagggacaaggattcagctccgtcacaccaccaccaaccaccgctcttg 137
Query: 61 agcagcctcgtcgtccgcccctcccacaccgagaccaccgccgccgctgattacgagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 agcagcctcgtcgtccgcccctcccacaccgagaccaccgccgccgctgattacgagtct 197
Query: 121 ggcgaactccaccgcgaccctcctcccccattttcccgctccgatcgatttcccgatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ggcgaactccaccgcgaccctcctcccccattttcccgctccgatcgatttcccgatgac 257
Query: 181 cctgggtatagaatccgtgcaggttcctcatctcctgttcaccgtagagatgcagatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cctgggtatagaatccgtgcaggttcctcatctcctgttcaccgtagagatgcagatcat 317
Query: 241 cgccttagttctgattacaatcacttgtcacgaagccgtggatatggaggggggagagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cgccttagttctgattacaatcacttgtcacgaagccgtggatatggaggggggagagat 377
Query: 301 cctggcagacatcgagacccttcacccccacatgctcgaggtagagtaggtggcaggcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cctggcagacatcgagacccttcacccccacatgctcgaggtagagtaggtggcaggcca 437
Query: 361 attggtagagcatttgatgggcctagcttcggtcctggacatgctagaggg 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 attggtagagcatttgatgggcctagcttcggtcctggacatgctagaggg 488
>gnl|LJGI|BP045911
Length = 352
Score = 254 bits (128), Expect = 1e-66
Identities = 149/156 (95%)
Strand = Plus / Minus
Query: 1018 ggtggtcggtgggctcgtgacgtgagagagagaagccgttcccctataagaggtggcccg 1077
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 352 ggtggtcggtgggctcgtgacgtgagagagagaatccgttcccctataagaggtggcccc 293
Query: 1078 ccggcaaaagactatcgcagggatatgtttgtgaatcgtggaagagatgataggcgtggt 1137
||||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 292 ccggccaaagactttcgccgggatatgtttgtgaatcgtggaagagattataggcgtggt 233
Query: 1138 ggtgtgggacgtgggagagttggaggaatgtattag 1173
|||||||||| |||||||||||||||||||||||||
Sbjct: 232 ggtgtgggacctgggagagttggaggaatgtattag 197