Miyakogusa Predicted Gene

Lj2g3v0798830.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0798830.1 Non Chatacterized Hit- tr|J3L206|J3L206_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,40.5,7e-19,FAMILY NOT NAMED,NULL; seg,NULL,CUFF.35464.1
         (774 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67587 weakly similar to UniRef100_A7PEM8 Cluster: Chr...  1025   0.0  

>gnl|LJGI|TC67587 weakly similar to UniRef100_A7PEM8 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (14%)
          Length = 657

 Score = 1025 bits (517), Expect = 0.0
 Identities = 520/521 (99%)
 Strand = Plus / Plus

                                                                       
Query: 254 ttgaaggccttatatctcacacaaatgcattttctgaggctgagtcacgaatccagtgcc 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttgaaggccttatatctcacacaaatgcattttctgaggctgagtcacgaatccagtgcc 60

                                                                       
Query: 314 tcaaacaaagacttttgtcatgtgaacaatatgctgacaagcttgccctcacaaatatgc 373
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcaaacaaagacttttgtcatgtgaacaatatgctgacaagcttgccctcacaaatatgc 120

                                                                       
Query: 374 aatggagggagaaattgccaagattccattccagatatttatcatctccacctatccttg 433
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 aatggagggagaaattgccaagattccattccagatgtttatcatctccacctatccttg 180

                                                                       
Query: 434 agagattaagctctgaaaaattaagtgattctaaaaatgatgttccttcaaaattagaaa 493
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagattaagctctgaaaaattaagtgattctaaaaatgatgttccttcaaaattagaaa 240

                                                                       
Query: 494 accatacactgaaatcacaagagcatttgccagtgtttatgaaccctcagaagccatgtg 553
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accatacactgaaatcacaagagcatttgccagtgtttatgaaccctcagaagccatgtg 300

                                                                       
Query: 554 ctgctaagaatttgaagccaactactgctacagttcatgggcacaacaatatggctatcg 613
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgctaagaatttgaagccaactactgctacagttcatgggcacaacaatatggctatcg 360

                                                                       
Query: 614 tggtacctgttcgcgacggtttttcagtgctaacaaaagtttcaaatcctacatttcatt 673
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggtacctgttcgcgacggtttttcagtgctaacaaaagtttcaaatcctacatttcatt 420

                                                                       
Query: 674 tccaaggtgctccgaaggttccacgccatagaagatccttgaatggcagtgacatcttat 733
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tccaaggtgctccgaaggttccacgccatagaagatccttgaatggcagtgacatcttat 480

                                                    
Query: 734 ggcttataaggcgtacgaaacgaacccatgagtcttaggta 774
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcttataaggcgtacgaaacgaacccatgagtcttaggta 521