Miyakogusa Predicted Gene

Lj2g3v0780580.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0780580.1 Non Chatacterized Hit- tr|I1LHG8|I1LHG8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,59.09,0,seg,NULL;
Myb_DNA-binding,SANT/Myb domain; MYB FAMILY TRANSCRIPTION FACTOR,NULL;
Homeodomain-like,Ho,NODE_71072_length_1176_cov_8.969388.path1.1
         (1071 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72117 similar to UniRef100_A7P9E1 Cluster: Chromosome...    60   3e-08
gnl|LJGI|TC65622 similar to UniRef100_A7P9E1 Cluster: Chromosome...    54   2e-06

>gnl|LJGI|TC72117 similar to UniRef100_A7P9E1 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 858

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 126/158 (79%)
 Strand = Plus / Plus

                                                                       
Query: 655 aggaagcaaaggagatgctggtccccggagcttcatcggcgttttgttgacgcgcttcaa 714
           ||||| || ||||||||||||||||||||| | || || || |||||| | ||  | || 
Sbjct: 58  aggaaacagaggagatgctggtccccggagttgcaccgccgatttgttaatgcattgcag 117

                                                                       
Query: 715 caacttggaggagctcaagaggccactcctaaacagattagagatctgatgcaggtggag 774
            | ||||||||  ||||||  || ||||| || || |||||||| || |||||||| || 
Sbjct: 118 aagcttggaggttctcaagcagcaactccaaagcaaattagagaactcatgcaggttgat 177

                                                 
Query: 775 ggcctcacaaatgatgaagtcaaaagccatttgcaaaa 812
           ||||| || ||||||||||| || ||||| ||||||||
Sbjct: 178 ggcctgaccaatgatgaagtgaagagccacttgcaaaa 215


>gnl|LJGI|TC65622 similar to UniRef100_A7P9E1 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 725

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 148 gccttcaaacgcgagctccctctttgcatgctcct 182
           ||||||||||||||||| ||||| |||||||||||
Sbjct: 276 gccttcaaacgcgagcttcctctctgcatgctcct 310