Miyakogusa Predicted Gene
- Lj2g3v0777020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0777020.1 tr|C0PK15|C0PK15_MAIZE Trihelix transcription
factor OS=Zea mays PE=2 SV=1,28.4,9e-19,coiled-coil,NULL;
Myb_DNA-bind_4,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.35397.1
(1076 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74087 similar to UniRef100_A7P7E1 Cluster: Chromosome... 1005 0.0
gnl|LJGI|TC81129 similar to UniRef100_A7P7E1 Cluster: Chromosome... 392 e-108
>gnl|LJGI|TC74087 similar to UniRef100_A7P7E1 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 639
Score = 1005 bits (507), Expect = 0.0
Identities = 517/519 (99%), Gaps = 1/519 (0%)
Strand = Plus / Plus
Query: 1 atggacgacatggaagatgatgcgaggtaccctcccaagtccttcccgttgagccgtcaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 atggacgacatggaagatgatgcgaggtaccctcccaagtccttcccgttgagctgtcaa 180
Query: 61 aacccctcttcccatcgccacaagcacccaaatcgagctgcaccattccaccatcgccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacccctcttcccatcgccacaagcacccaaatcgagctgcaccattccaccatcgccca 240
Query: 121 cccaccactcgctacaaggtggatgaagaagacgacgaggaattcgaggacgctaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccaccactcgctacaaggtggatgaagaagacgacgaggaattcgaggacgctaaggaa 300
Query: 181 ttcgacgattacaacgacgatgacgacgcaccggaaaatgggtatgctgggaatttcgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcgacgattacaacgacgatgacgacgcaccggaaaatgggtatgctgggaatttcgaa 360
Query: 241 gaggatgatgggtttgccaggaagaagaggaagctacgaggtggtccctccaactatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggatgatgggtttgccaggaagaagaggaagctacgaggtggtccctccaactatgag 420
Query: 301 ttcgcgccacgggcgaagttcccattcgggaatcgcggtggttcttcctccgcggcggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcgcgccacgggcgaagttcccattcgggaatcgcggtggttcttcctccgcggcggag 480
Query: 361 gaatggacggagcatgcgacgcttgtgctgttggaggtgtggggggat-aagtttcttca 419
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 gaatggacggagcatgcgacgcttgtgctgttggaggtgtggggggataaagtttcttca 540
Query: 420 aattgggaggaacagtttgaggtcagaggagtggcatgaggttgctgagaaggtttctga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aattgggaggaacagtttgaggtcagaggagtggcatgaggttgctgagaaggtttctga 600
Query: 480 tgagttgaaggtggaaaggacggtggcgcaatgcatgag 518
|||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgagttgaaggtggaaaggacggtggcgcaatgcatgag 639
>gnl|LJGI|TC81129 similar to UniRef100_A7P7E1 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 548
Score = 392 bits (198), Expect = e-108
Identities = 201/202 (99%)
Strand = Plus / Plus
Query: 875 agtttgggaaaatatatgagaagattgagaacactaagaggcagcagatgatggagttgg 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttgggaaaatatatgagaagattgagaacactaagaggcagcagatgatggagttgg 60
Query: 935 agaagatgaggttggattttaacagggagttggagttgcagaagaagcagattttggaaa 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaagatgaggttggattttaacagggagttggagttgcagaagaagcagattttggaaa 120
Query: 995 gggctgaggctgaaattgcaaagatgcaggaagtggatgaggatgagacagactcttcta 1054
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggctgaggctgaaattgccaagatgcaggaagtggatgaggatgagacagactcttcta 180
Query: 1055 cagagaatctcagtgaataatt 1076
||||||||||||||||||||||
Sbjct: 181 cagagaatctcagtgaataatt 202