Miyakogusa Predicted Gene
- Lj2g3v0766610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0766610.1 tr|Q6PH01|Q6PH01_DANRE ArfGAP with FG repeats 1
OS=Danio rerio GN=agfg1a PE=2 SV=1,38.52,3e-19,REVINTRACTNG,Arf GTPase
activating protein; Putative GTP-ase activating proteins for the,Arf
GTPase ,CUFF.35401.1
(486 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67435 similar to UniRef100_A7PES9 Cluster: Chromosome... 712 0.0
gnl|LJGI|FS318679 similar to UniRef100_A7PES9 Cluster: Chromosom... 335 2e-91
gnl|LJGI|BP043685 homologue to UniRef100_A7QA01 Cluster: Chromos... 58 5e-08
>gnl|LJGI|TC67435 similar to UniRef100_A7PES9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 719
Score = 712 bits (359), Expect = 0.0
Identities = 359/359 (100%)
Strand = Plus / Plus
Query: 1 atggcgagtcggaaggaggacgagaaaaacgagcgcgtcattcgaggtctgctcaagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggcgagtcggaaggaggacgagaaaaacgagcgcgtcattcgaggtctgctcaagctt 420
Query: 61 gaatcgaatcggaggtgcattaactgcaacagcctgggaccacaatatgtgtgcacgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaatcgaatcggaggtgcattaactgcaacagcctgggaccacaatatgtgtgcacgaat 480
Query: 121 ttctggacgtttgtttgcactaactgcagtggaatacaccgggaatttactcatcgagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttctggacgtttgtttgcactaactgcagtggaatacaccgggaatttactcatcgagtg 540
Query: 181 aaatcaatttcaatggctaaatttacttcgcaagaagttattgcacttcaagaaggagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaatcaatttcaatggctaaatttacttcgcaagaagttattgcacttcaagaaggagga 600
Query: 241 aatcagcgtgcgaaagaaatttatttcaaagaatgggatgcacagcatcaatcttccccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatcagcgtgcgaaagaaatttatttcaaagaatgggatgcacagcatcaatcttccccc 660
Query: 301 gatagcaataacgttaataggcttcgggactttattaagcatgtttatgtggatagaag 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatagcaataacgttaataggcttcgggactttattaagcatgtttatgtggatagaag 719
>gnl|LJGI|FS318679 similar to UniRef100_A7PES9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 806
Score = 335 bits (169), Expect = 2e-91
Identities = 348/408 (85%), Gaps = 11/408 (2%)
Strand = Plus / Plus
Query: 80 ttaactgcaacagcctgggaccacaatatgtgtgcacgaatttctggacgtttgtttgca 139
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 191 ttaactgcaacagtttgggaccacaatatgtgtgcacaaatttctggacgtttgtttgca 250
Query: 140 ctaactgcagtggaatacaccgggaatttactcatcgagtgaaatcaatttcaatggcta 199
| |||||||||||||||||||| |||||||| |||||||| |||||| |||||||||| |
Sbjct: 251 caaactgcagtggaatacaccgagaatttacacatcgagtaaaatcagtttcaatggcaa 310
Query: 200 aatttacttcgcaagaagttattgcacttcaagaaggaggaaatcagcgtgcgaaagaaa 259
|||||||| | |||||||||| ||||||||||||||||||||||||| ||| |||||||
Sbjct: 311 aatttactgcacaagaagttagcgcacttcaagaaggaggaaatcagcatgcaaaagaaa 370
Query: 260 tttatttcaaagaatgggatgcacagcatcaatcttcccccgatagcaataacgttaata 319
| ||||| |||||||||||| |||| | ||| |||| || |||||| |||| ||| | |
Sbjct: 371 tctattttaaagaatgggatccacaacgtcattctttgcctgatagccataatgttgaca 430
Query: 320 ggcttcgggactttattaagcatgtttatgtggatagaagatacactggagataagactt 379
|||| ||||| ||||||||||| ||||||||||||| |||| |||||| || | || |
Sbjct: 431 ggctccgggagtttattaagcacatttatgtggataggagattcactggtgagagaacct 490
Query: 380 ctgacaaaccaccaa-aagtaaaggcgggcgacaaagatgattcctatgaaaacagaaga 438
||||||||| |||| |||| ||||| |||||||||||||||||||| ||
Sbjct: 491 atgacaaacctccaagaagt----------gacaaggatgattcctatgaaaacaggagg 540
Query: 439 gctgaggcataccagggaggatctagaagccctccatatgaagacaca 486
|||| |||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 541 attgagacataccagggaggacctaaaagccctccatatgaagacaca 588
>gnl|LJGI|BP043685 homologue to UniRef100_A7QA01 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 407
Score = 58.0 bits (29), Expect = 5e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 95 tgggaccacaatatgtgtgcacgaatttctggacgtttgtttgcactaactgcagtggaa 154
|||||||||||||||| ||||| ||||| ||||| || ||||||| | ||||||||||
Sbjct: 327 tgggaccacaatatgtatgcacaaatttttggaccttcatttgcacgacatgcagtggaa 386
Query: 155 tacaccgggaatttactcatc 175
|||| || || ||||| ||||
Sbjct: 387 tacatcgtgagtttacacatc 407