Miyakogusa Predicted Gene
- Lj2g3v0720150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0720150.1 tr|Q9LS60|Q9LS60_ARATH Gb|AAF26481.1
OS=Arabidopsis thaliana GN=At3g18300 PE=2
SV=1,34.15,5e-19,seg,NULL,CUFF.35266.1
(721 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO031229 similar to UniRef100_A7PGV9 Cluster: Chromosom... 1007 0.0
gnl|LJGI|GO018487 similar to UniRef100_A7PGV9 Cluster: Chromosom... 567 e-161
gnl|LJGI|TC67818 similar to UniRef100_A7PGV9 Cluster: Chromosome... 56 3e-07
gnl|LJGI|BW611993 homologue to UniRef100_Q2W1I3 Cluster: Submaxi... 52 5e-06
gnl|LJGI|TC68515 weakly similar to UniRef100_A7QFL9 Cluster: Chr... 52 5e-06
>gnl|LJGI|GO031229 similar to UniRef100_A7PGV9 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 640
Score = 1007 bits (508), Expect = 0.0
Identities = 511/512 (99%)
Strand = Plus / Minus
Query: 210 aactcagatacaagacaacaaaaccaccactccaaaacacagtcatcatgtggagcctcc 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 aactcagatacaagacaacaaaaccaccactccaaaacacagtcatcatgtggagcctcc 581
Query: 270 tcattcaaaacttcctccgcgtccatcaccaagtgttgacaaagtgaagaaagaaaccat 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tcattcaaaacttcctccgcgtccatcaccaagtgttgacaaagtgaagaaagaaaccat 521
Query: 330 tagagaactcatgatagatgtcagtgctaatggtgagagaaagaaatcatctttctgggg 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tagagaactcatgatagatgtcagtgctaatggtgagagaaagaaatcatctttctgggg 461
Query: 390 atttagtagaagtaagagtctcaattgtgatgatacaaagaagattatggtttgcccttt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atttagtagaagtaagagtctcaattgtgatgatacaaagaagattatggtttgcccttt 401
Query: 450 acctcttttgtcaagaagcaactcaatgggttcagtggcaaattcaaagagaatgagttc 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acctcttttgtcaagaagcaactcaatgggttcagtggcaaattcaaagagaatgagttc 341
Query: 510 aaacaaggcagctaagtcatcatcatcatcatattcatatcctatgcaaaaatctacttc 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaacaaggcagctaagtcatcatcatcatcatattcatatcctatgcaaaaatctacttc 281
Query: 570 aggtaagacctatggaggatcttttggcaatggtcattgggttagtcctgtcttaaatgt 629
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 280 aggtaagacctatggaggatcttttggcaatggtcgttgggttagtcctgtcttaaatgt 221
Query: 630 accaactccttgtgtttcaaagggaagttcaaatctctttgggttgggttcatttttacg 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 accaactccttgtgtttcaaagggaagttcaaatctctttgggttgggttcatttttacg 161
Query: 690 tgtaggcaaggtcaagaggaacaagaagtgat 721
||||||||||||||||||||||||||||||||
Sbjct: 160 tgtaggcaaggtcaagaggaacaagaagtgat 129
>gnl|LJGI|GO018487 similar to UniRef100_A7PGV9 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 782
Score = 567 bits (286), Expect = e-161
Identities = 357/369 (96%), Gaps = 10/369 (2%)
Strand = Plus / Plus
Query: 1 atgctaatgtgttcagaaacaagtcctcctcgtctctctttctctcatgatctgtctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atgctaatgtgttcagaaacaagtcctcctcgtctctctttctctcatgatctgtctgaa 483
Query: 61 ctacaagttctgccactgatccaagatgttcatttcagagacactttgcttctggactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctacaagttctgccactgatccaagatgttcatttcagagacactttgcttctggactca 543
Query: 121 aatcctgaatttgagtttagcacaagcagtatccttgaatttgaatcatcttcagcagat 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aatcctgaatctgagtttagcacaagcagtatccttgaatttgaatcatcttcagcagat 603
Query: 181 gaacttttctccaatggagtgatccttccaactcagatacaagacaacaaaaccaccact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gaacttttctccaatggagtgatccttccaactcagatacaagacaacaaaaccaccact 663
Query: 241 ccaaaacacagtcatcatgtggagcctcctcattcaaaacttcctccgcgtccatcacca 300
|| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 664 cc-aaacacagtcatcatgtggagcctcctcattc-aaacttcctccgcgt-catcacc- 719
Query: 301 agtgttgacaaagtgaagaaagaaaccattagagaactcatgatagatgtcagtgctaat 360
||||||||| |||||||||| ||||| ||||| |||||||||||||||||||||| ||
Sbjct: 720 agtgttgac-aagtgaagaa--gaacca-tagag-actcatgatagatgtcagtgct-at 773
Query: 361 ggtgagaga 369
|||||||||
Sbjct: 774 ggtgagaga 782
>gnl|LJGI|TC67818 similar to UniRef100_A7PGV9 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 1333
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 154 cttgaatttgaatcatcttcagcagatgaacttttctccaatggagtgatccttcc 209
||||| |||||||||||||| ||||| || |||||||| ||||| ||||| |||||
Sbjct: 429 cttgagtttgaatcatcttctgcagacgagcttttctcgaatggggtgatacttcc 484
>gnl|LJGI|BW611993 homologue to UniRef100_Q2W1I3 Cluster: Submaxillary gland androgen
regulated protein 1; n=1; Magnetospirillum magneticum
AMB-1|Rep: Submaxillary gland androgen regulated protein
1 - Magnetospirillum magneticum (strain AMB-1 / ATCC
700264), partial (18%)
Length = 486
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 523 aagtcatcatcatcatcatattcatatcct 552
||||||||||||||||||| ||||||||||
Sbjct: 169 aagtcatcatcatcatcatcttcatatcct 198
>gnl|LJGI|TC68515 weakly similar to UniRef100_A7QFL9 Cluster: Chromosome chr8
scaffold_88, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_88, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 1004
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 523 aagtcatcatcatcatcatattcatatcct 552
||||||||||||||||||| ||||||||||
Sbjct: 98 aagtcatcatcatcatcatcttcatatcct 127