Miyakogusa Predicted Gene

Lj2g3v0715000.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0715000.1 CUFF.35255.1
         (654 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV414192                                                     287   4e-77

>gnl|LJGI|AV414192 
          Length = 160

 Score =  287 bits (145), Expect = 4e-77
 Identities = 158/161 (98%), Gaps = 1/161 (0%)
 Strand = Plus / Minus

                                                                       
Query: 461 tcccgtgttacccgcaacctcagcaccctcctctcctccgttacccgctgttcccttcaa 520
           |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||
Sbjct: 160 tcccgtgttacccgcaacctcagcaccctcctctcctcccg-acccgctgttcccttcaa 102

                                                                       
Query: 521 gagccattgataacccgacctcgtcgagtaaagtccagacatatccccacgccaaacctg 580
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gagccattgataacccgacctcgtcgagtaaagtccagacatatccccacgccaaacctg 42

                                                    
Query: 581 acagtcggtcattgaatcatcgagccacgccgggagagtgt 621
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 41  acagtcggtcattgaatcatcgagccacgccgggagagtgt 1