Miyakogusa Predicted Gene
- Lj2g3v0694630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0694630.1 tr|D7L8F8|D7L8F8_ARALL Octicosapeptide/Phox/Bem1p
domain-containing protein OS=Arabidopsis lyrata
su,31.91,6e-16,seg,NULL; coiled-coil,NULL,CUFF.35227.1
(1218 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS317926 similar to UniRef100_A7PGZ0 Cluster: Chromosom... 878 0.0
gnl|LJGI|TC72371 similar to UniRef100_Q9ZU48 Cluster: Expressed ... 58 1e-07
gnl|LJGI|TC67236 similar to UniRef100_Q9ZU48 Cluster: Expressed ... 58 1e-07
>gnl|LJGI|FS317926 similar to UniRef100_A7PGZ0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 796
Score = 878 bits (443), Expect = 0.0
Identities = 443/443 (100%)
Strand = Plus / Plus
Query: 3 ggttcgcgtcgacgacaatggtgggactagcaggcttcagcaagagaagaggattgaaga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggttcgcgtcgacgacaatggtgggactagcaggcttcagcaagagaagaggattgaaga 413
Query: 63 gcagtttgctcagatgacctttggtgcaagtggggtgaaaccagatgatgggtttgttgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gcagtttgctcagatgacctttggtgcaagtggggtgaaaccagatgatgggtttgttgt 473
Query: 123 ttcttctgctatggctatgcctacaatgactccatctaatgtgactattgtatcagctgg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttcttctgctatggctatgcctacaatgactccatctaatgtgactattgtatcagctgg 533
Query: 183 ggtggttcctactagtgagtatatgaatagggttgtttctgatgatgagagatcagatca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ggtggttcctactagtgagtatatgaatagggttgtttctgatgatgagagatcagatca 593
Query: 243 tggagcacctgttgggtccagaaagccccctttaccattgcagcttgtgcaacctaagac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tggagcacctgttgggtccagaaagccccctttaccattgcagcttgtgcaacctaagac 653
Query: 303 tagtgctggtggtttgagtttgccttctccagattcagttgcaagtgatagtagtagtat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tagtgctggtggtttgagtttgccttctccagattcagttgcaagtgatagtagtagtat 713
Query: 363 tgcatctacaaattctttctctaggacagtttactatcaagaacaagtcccagctggaca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tgcatctacaaattctttctctaggacagtttactatcaagaacaagtcccagctggaca 773
Query: 423 tgtagacaacaaatcatatgcca 445
|||||||||||||||||||||||
Sbjct: 774 tgtagacaacaaatcatatgcca 796
>gnl|LJGI|TC72371 similar to UniRef100_Q9ZU48 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress), partial (28%)
Length = 1512
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 321 tttgccttctccagattcagttgcaagtgatagtagt 357
|||||||||||| ||||||||| ||||||||||||||
Sbjct: 1343 tttgccttctcctgattcagtttcaagtgatagtagt 1379
>gnl|LJGI|TC67236 similar to UniRef100_Q9ZU48 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 954
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 321 tttgccttctccagattcagttgcaagtgatagtagt 357
|||||||||||| ||||||||| ||||||||||||||
Sbjct: 820 tttgccttctcctgattcagtttcaagtgatagtagt 856