Miyakogusa Predicted Gene

Lj2g3v0691450.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0691450.1 Non Chatacterized Hit- tr|G7IAW0|G7IAW0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,40.61,2e-18,seg,NULL; DUF295,Protein of unknown function
DUF295,gene.g39784.t1.1
         (1147 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024501 similar to UniRef100_A2Q2D9 Cluster: Cyclin-li...   161   1e-38

>gnl|LJGI|GO024501 similar to UniRef100_A2Q2D9 Cluster: Cyclin-like F-box; n=1; Medicago
            truncatula|Rep: Cyclin-like F-box - Medicago truncatula
            (Barrel medic), partial (6%)
          Length = 723

 Score =  161 bits (81), Expect = 1e-38
 Identities = 272/331 (82%), Gaps = 11/331 (3%)
 Strand = Plus / Plus

                                                                        
Query: 821  tatacaagttggaactagatgcacaatatgggaaggttttgcaaatgttgaaactagata 880
            |||| ||||||||||||||||| ||| |||||||||||||||||||| ||||||| ||  
Sbjct: 267  tatataagttggaactagatgcccaaaatgggaaggttttgcaaatgctgaaactggagg 326

                                                                        
Query: 881  atttgggagacaatgttttgtttgtaggtgatcatggcgattcaactgttgcttcatttt 940
            |||||||||||||  ||||||||||| ||||| || | |||||||||| ||  || | ||
Sbjct: 327  atttgggagacaacattttgtttgtaagtgatgatagtgattcaactgctgtgtcgtctt 386

                                                                        
Query: 941  cctatttctctaattctctgcaaaaggattcaatctactactatgagaatggtattgatg 1000
            |||||||||||||||  ||||||||||| ||||| ||||||  |   ||||    || ||
Sbjct: 387  cctatttctctaattgcctgcaaaaggactcaatttactacact---aatg---atgttg 440

                                                                        
Query: 1001 agacaccaa-acatctaccctcatggcccatttgatttaagggtctataatgtaaaggag 1059
               ||||||  | ||  | |||||| |||| |||||||||| ||||||||||||||||||
Sbjct: 441  gctcaccaattcctc-cctctcatgacccacttgatttaagagtctataatgtaaaggag 499

                                                                        
Query: 1060 ggaagattaattcaacagtatcctctc---aacccttccttcaagcgtgtgccacctttg 1116
            ||||| || |||||||| || ||| ||   || |||||||||| ||||||| |||||| |
Sbjct: 500  ggaaggtttattcaacattaccctttcaataatccttccttcatgcgtgtgtcaccttcg 559

                                           
Query: 1117 ttatggattctaccacaatttcaatgggatt 1147
            |||||||||||||||  ||| ||||||||||
Sbjct: 560  ttatggattctaccatcattccaatgggatt 590



 Score = 61.9 bits (31), Expect = 8e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 769 tcattagaaggagacctatggttggtgagaagatttttg 807
           ||||||||||||||||||||| ||||||||||| |||||
Sbjct: 179 tcattagaaggagacctatggatggtgagaagaattttg 217