Miyakogusa Predicted Gene
- Lj2g3v0676890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0676890.1 Non Chatacterized Hit- tr|I1KQK0|I1KQK0_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,87.96,0,Ras subfamily
of RAS small GTPases,Small GTPase superfamily, Ras type; Rab subfamily
of small GTPase,NODE_102661_length_688_cov_7.805233.path2.1
(576 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73675 similar to UniRef100_Q6ZXT1 Cluster: Small GTPa... 944 0.0
gnl|LJGI|TC79726 UniRef100_Q40196 Cluster: RAB11F; n=1; Lotus ja... 420 e-117
gnl|LJGI|BW595035 homologue to UniRef100_Q40192 Cluster: RAB11B;... 70 2e-11
gnl|LJGI|TC59323 UniRef100_Q40192 Cluster: RAB11B; n=1; Lotus ja... 62 4e-09
>gnl|LJGI|TC73675 similar to UniRef100_Q6ZXT1 Cluster: Small GTPase; n=1; Medicago
sativa|Rep: Small GTPase - Medicago sativa (Alfalfa),
partial (83%)
Length = 583
Score = 944 bits (476), Expect = 0.0
Identities = 476/476 (100%)
Strand = Plus / Plus
Query: 101 caaaagatgaattccggttggattcgaagcccactattggagttgaatttgcttacagta 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaagatgaattccggttggattcgaagcccactattggagttgaatttgcttacagta 60
Query: 161 atatcaaggtcagagacaaactcatcaaagctcagatatgggatactgccggccaagaga 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatcaaggtcagagacaaactcatcaaagctcagatatgggatactgccggccaagaga 120
Query: 221 ggttcagagcaatcacaagctcgtattacagaggagccttgggggcaatggtggtgtatg 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttcagagcaatcacaagctcgtattacagaggagccttgggggcaatggtggtgtatg 180
Query: 281 acataacgaggcgatcaagctatgagaatgtaagaaactggttattggagctgagagagt 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acataacgaggcgatcaagctatgagaatgtaagaaactggttattggagctgagagagt 240
Query: 341 ttggtggggaagacatggtggttattctggtgggaaacaaaagtgatctgggtcaatcaa 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggtggggaagacatggtggttattctggtgggaaacaaaagtgatctgggtcaatcaa 300
Query: 401 gagaagttgagaaggaagaaggtaaagggtttgcagagacagaagggttgtgtttcatgg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagaagttgagaaggaagaaggtaaagggtttgcagagacagaagggttgtgtttcatgg 360
Query: 461 aaacctctgctctgaagaatctgaacgttgaggaagtgttcttagaaatgattacaaaga 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaacctctgctctgaagaatctgaacgttgaggaagtgttcttagaaatgattacaaaga 420
Query: 521 tacttgacatcacatgccagagaagtttggaagccaaagttgacgagaaaccgatt 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacttgacatcacatgccagagaagtttggaagccaaagttgacgagaaaccgatt 476
>gnl|LJGI|TC79726 UniRef100_Q40196 Cluster: RAB11F; n=1; Lotus japonicus|Rep: RAB11F
- Lotus japonicus, complete
Length = 1099
Score = 420 bits (212), Expect = e-117
Identities = 467/552 (84%)
Strand = Plus / Plus
Query: 7 gctgatgcatttgatgaagagtgtgattatctgttcaagactgtgttgagtggtgacgct 66
||||||||||||||||| |||||||||| ||||||||| |||| ||| ||| ||| ||
Sbjct: 116 gctgatgcatttgatgagcagtgtgattacctgttcaaggctgttctgattggagactct 175
Query: 67 ggagttgggaaatcaaatctgctgtcaagggttgcaaaagatgaattccggttggattcg 126
||||||||||||||||||||| | |||||| ||||||||||||| ||||| ||||||||
Sbjct: 176 ggagttgggaaatcaaatctgatctcaaggtttgcaaaagatgagttccgtttggattca 235
Query: 127 aagcccactattggagttgaatttgcttacagtaatatcaaggtcagagacaaactcatc 186
|||||||| || || || ||||| |||||| | || || || |||||||| || ||||||
Sbjct: 236 aagcccacgataggtgtcgaattcgcttaccggaacattaaagtcagagataagctcatc 295
Query: 187 aaagctcagatatgggatactgccggccaagagaggttcagagcaatcacaagctcgtat 246
||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 296 aaagctcagatatgggacactgccggccaagaaaggtttagagctatcacaagctcatac 355
Query: 247 tacagaggagccttgggggcaatggtggtgtatgacataacgaggcgatcaagctatgag 306
|||||||||||||||||| ||||| | |||||||||||||| |||||| ||| | | |
Sbjct: 356 tacagaggagccttggggccaatgctagtgtatgacataaccaggcgaccaacatttatg 415
Query: 307 aatgtaagaaactggttattggagctgagagagtttggtggggaagacatggtggttatt 366
||||| | ||| |||||| |||||||||||||| || || |||||||||||| ||
Sbjct: 416 aatgtgataaaatggttacatgagctgagagagttcggaaatgaggacatggtggttgtt 475
Query: 367 ctggtgggaaacaaaagtgatctgggtcaatcaagagaagttgagaaggaagaaggtaaa 426
||||||| |||||| |||| ||| ||||||||| ||||||||||||||||| || ||
Sbjct: 476 ctggtggcgaacaaatctgatttggttcaatcaagggaagttgagaaggaagagggagaa 535
Query: 427 gggtttgcagagacagaagggttgtgtttcatggaaacctctgctctgaagaatctgaac 486
| ||||||||| | ||||||||||||||| ||||||||||||||| || ||||| ||||
Sbjct: 536 gagtttgcagaaatagaagggttgtgttttatggaaacctctgctttgcagaatttgaat 595
Query: 487 gttgaggaagtgttcttagaaatgattacaaagatacttgacatcacatgccagagaagt 546
|||||||||| |||||||||||||| || ||||| | |||||||| | |||||| |||
Sbjct: 596 gttgaggaagcattcttagaaatgatcactaagatccatgacatcataagccagaaaagc 655
Query: 547 ttggaagccaaa 558
|||||| |||||
Sbjct: 656 ttggaaaccaaa 667
>gnl|LJGI|BW595035 homologue to UniRef100_Q40192 Cluster: RAB11B; n=1; Lotus
japonicus|Rep: RAB11B - Lotus japonicus, partial (45%)
Length = 462
Score = 69.9 bits (35), Expect = 2e-11
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 177 caaactcatcaaagctcagatatgggatactgccggccaagagaggttcagagcaatcac 236
|||| |||||||||| ||||| ||||||||||| |||||||| |||| ||| || | ||
Sbjct: 288 caaagtcatcaaagcccagatctgggatactgctggccaagaaaggtacagggctgtaac 347
Query: 237 aagctcgtattacagaggagccttgggggcaatggtggtgtatgacataac 287
|| | ||||||||||| || || ||||| ||| ||||||||||||||||
Sbjct: 348 tagtgcatattacagaggtgcattaggggccatgctggtgtatgacataac 398
>gnl|LJGI|TC59323 UniRef100_Q40192 Cluster: RAB11B; n=1; Lotus japonicus|Rep: RAB11B
- Lotus japonicus, complete
Length = 1331
Score = 61.9 bits (31), Expect = 4e-09
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 177 caaactcatcaaagctcagatatgggatactgccggccaagagaggttcagagcaatcac 236
|||| |||||||||| ||||| ||||| ||||| || ||||| |||| ||| || | ||
Sbjct: 598 caaagtcatcaaagcccagatctgggacactgctggtcaagaaaggtacagggctgtgac 657
Query: 237 aagctcgtattacagaggagccttgggggcaatggtggtgtatgacataac 287
||| | || ||||||||||| || || |||||| ||||||||||||||||
Sbjct: 658 aagtgcatactacagaggagcattaggagcaatgctggtgtatgacataac 708