Miyakogusa Predicted Gene
- Lj2g3v0674850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0674850.1 tr|G7LE58|G7LE58_MEDTR Glutamyl-tRNA(Gln)
amidotransferase subunit A OS=Medicago truncatula
GN=MTR_8,80.07,0,AMIDASE,NULL; AMIDASE,Amidase; Amidase,Amidase;
TPR_11,NULL; TPR_2,Tetratricopeptide TPR2; Amidase s,CUFF.35192.1
(1740 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61405 similar to UniRef100_A7PH66 Cluster: Chromosome... 900 0.0
gnl|LJGI|TC70371 similar to UniRef100_A7PH66 Cluster: Chromosome... 454 e-127
gnl|LJGI|BW623705 similar to UniRef100_A7PH66 Cluster: Chromosom... 283 2e-75
gnl|LJGI|FS361152 similar to UniRef100_A7PH66 Cluster: Chromosom... 246 4e-64
gnl|LJGI|TC61165 similar to UniRef100_A7PH66 Cluster: Chromosome... 186 3e-46
>gnl|LJGI|TC61405 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 785
Score = 900 bits (454), Expect = 0.0
Identities = 454/454 (100%)
Strand = Plus / Plus
Query: 188 acttcgccgtctctgacctatttgacatagatggacatgtgaccacgtttgggcatccag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 acttcgccgtctctgacctatttgacatagatggacatgtgaccacgtttgggcatccag 391
Query: 248 agtgggcaaggacgcatgaagctgcttcccagacatcacctgtggtttctgctctggttg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agtgggcaaggacgcatgaagctgcttcccagacatcacctgtggtttctgctctggttg 451
Query: 308 aaggaggtgcaacctgcattgggacaactgttgtggatgaactggcatatggtattagtg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaggaggtgcaacctgcattgggacaactgttgtggatgaactggcatatggtattagtg 511
Query: 368 gtgaaaataaacagtatggaacaccaactaatcctgctgtgcctgctcgggtaccgggtg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtgaaaataaacagtatggaacaccaactaatcctgctgtgcctgctcgggtaccgggtg 571
Query: 428 gctcctctagtggtgctgctgtggctgttgcttctaatttagttgactttgcactaggta 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gctcctctagtggtgctgctgtggctgttgcttctaatttagttgactttgcactaggta 631
Query: 488 ttgataccatcggaggggtgagactaccggccggattttgtggcattttgggatttcggc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ttgataccatcggaggggtgagactaccggccggattttgtggcattttgggatttcggc 691
Query: 548 cttcatatggggctgtttctcatattggaatcatacctgtttcgaaaagtctggagactg 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cttcatatggggctgtttctcatattggaatcatacctgtttcgaaaagtctggagactg 751
Query: 608 ttggttggtttgctagggatcctaatattttgcg 641
||||||||||||||||||||||||||||||||||
Sbjct: 752 ttggttggtttgctagggatcctaatattttgcg 785
Score = 266 bits (134), Expect = 4e-70
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 1 atggcgtctcaatctaccaatctatgggtcttgttgggacttggtttggctggaatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggcgtctcaatctaccaatctatgggtcttgttgggacttggtttggctggaatcttc 204
Query: 61 ctcatgaccagaaagctcaagaagcgttcaatcaagcaagactttggtgctttcatccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctcatgaccagaaagctcaagaagcgttcaatcaagcaagactttggtgctttcatccac 264
Query: 121 aagcttctgcttct 134
||||||||||||||
Sbjct: 265 aagcttctgcttct 278
>gnl|LJGI|TC70371 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 677
Score = 454 bits (229), Expect = e-127
Identities = 229/229 (100%)
Strand = Plus / Plus
Query: 1512 tagtggcaataatgcaacatactacaataacagagctcaagcattcctagaacttgggag 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagtggcaataatgcaacatactacaataacagagctcaagcattcctagaacttgggag 60
Query: 1572 ttatctccaagcagaggcagattgcacaaatgcaattagcatcgacaaaaagaatgtgaa 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatctccaagcagaggcagattgcacaaatgcaattagcatcgacaaaaagaatgtgaa 120
Query: 1632 agcctattttcgtagaggtagagcaagagagatgctaggctactacaaggatgcaattga 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcctattttcgtagaggtagagcaagagagatgctaggctactacaaggatgcaattga 180
Query: 1692 tgattttaaatacgcccttgtacttgagccgaccaacaaaatggcagcc 1740
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgattttaaatacgcccttgtacttgagccgaccaacaaaatggcagcc 229
>gnl|LJGI|BW623705 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 485
Score = 283 bits (143), Expect = 2e-75
Identities = 326/387 (84%)
Strand = Plus / Plus
Query: 1062 atctgttagaaatgagatgcgtgatgctgtcaattctcttttgaaggatgaaggaatatt 1121
|||||||| || ||||||||||| |||| | ||||| ||||||||||||||| |||| ||
Sbjct: 98 atctgttaaaagtgagatgcgtgctgctataaattcgcttttgaaggatgaaagaatttt 157
Query: 1122 ggtcatcccaactgtagctaatcctcctccaaaattgggagggaaggagatcatatcaga 1181
||| ||||| ||||||||| |||||||||||||||| || ||||| |||||| ||||| |
Sbjct: 158 ggtgatccctactgtagctgatcctcctccaaaattaggtgggaaagagatcctatcaca 217
Query: 1182 ggactatcggagcaatgcattaagtctgctgagtattgcaagcatatctggttgctgtca 1241
||| |||| |||| || || ||| ||| |||||||| |||||||| |||||||||||
Sbjct: 218 ggattatcagagccatatgtttagtgcgctaagtattgctagcatatcgggttgctgtca 277
Query: 1242 ggtcgcaataccatttggattttatgacaagtgtccagtttcagtgtccttgatagcccg 1301
|||| |||| ||| | ||||| || ||||||| ||| |||||||||||||| |||| ||
Sbjct: 278 ggtcacaatcccactgggattctacgacaagtatcctgtttcagtgtccttattagctcg 337
Query: 1302 gcaaggtggtgatcgttttctactggacacactacagaccatgtattcaactatccagga 1361
||| ||||||||||| ||| |||| |||||||||||||||||||| ||||| |||| ||
Sbjct: 338 gcatggtggtgatcgctttttacttgacacactacagaccatgtacacaactctccaaga 397
Query: 1362 gcaggttgaaattgctgctgaaactaaactgtcaagaaatgttattactcaagaacaatc 1421
||||| ||| |||||| | ||| ||||| ||||| |||||| | | | | ||||||||
Sbjct: 398 gcaggctgatattgcttccaaaagtaaaccatcaagcaatgttgtcagtaaggaacaatc 457
Query: 1422 tgctgaaattgccaaagagaagggaaa 1448
|||||||||||||||||||||||||||
Sbjct: 458 tgctgaaattgccaaagagaagggaaa 484
>gnl|LJGI|FS361152 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 696
Score = 246 bits (124), Expect = 4e-64
Identities = 214/244 (87%)
Strand = Plus / Minus
Query: 1496 cagaagctatcaaacttagtggcaataatgcaacatactacaataacagagctcaagcat 1555
|||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||
Sbjct: 696 cagaagctatcaaactctgtggagataatgcgacatactacaataacagggctcaagcat 637
Query: 1556 tcctagaacttgggagttatctccaagcagaggcagattgcacaaatgcaattagcatcg 1615
||||||||||| ||||| |||||||| |||||||||| ||||| || |||| ||| |
Sbjct: 636 atctagaacttggaagttacctccaagctgaggcagattctacaaaagctattaacattg 577
Query: 1616 acaaaaagaatgtgaaagcctattttcgtagaggtagagcaagagagatgctaggctact 1675
|||| ||||||||||| || |||||||||||||||| ||| |||||||||||||||||||
Sbjct: 576 acaagaagaatgtgaaggcgtattttcgtagaggtacagctagagagatgctaggctact 517
Query: 1676 acaaggatgcaattgatgattttaaatacgcccttgtacttgagccgaccaacaaaatgg 1735
| ||||||||| |||||||||||| ||| || || ||||||||||| |||||||||| ||
Sbjct: 516 ataaggatgcatttgatgattttacatatgctctggtacttgagccaaccaacaaaaggg 457
Query: 1736 cagc 1739
||||
Sbjct: 456 cagc 453
>gnl|LJGI|TC61165 similar to UniRef100_A7PH66 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 773
Score = 186 bits (94), Expect = 3e-46
Identities = 241/290 (83%)
Strand = Plus / Plus
Query: 352 gcatatggtattagtggtgaaaataaacagtatggaacaccaactaatcctgctgtgcct 411
||||| ||||||| ||| |||| || || |||||||| || || || ||||||||||||
Sbjct: 478 gcatacggtattactggccaaaacaagcattatggaacgcccaccaaccctgctgtgcct 537
Query: 412 gctcgggtaccgggtggctcctctagtggtgctgctgtggctgttgcttctaatttagtt 471
|||| | || ||||| |||||||||||||||||||| ||||||||| ||||||| |||
Sbjct: 538 tctcgactgcccggtggatcctctagtggtgctgctgtcgctgttgctgctaattttgtt 597
Query: 472 gactttgcactaggtattgataccatcggaggggtgagactaccggccggattttgtggc 531
| || || | ||||||||||| | |||||||| |||||||| || | |||||||| |
Sbjct: 598 catttctcattgggtattgatactactggaggggtcagactacctgctgcattttgtgcc 657
Query: 532 attttgggatttcggccttcatatggggctgtttctcatattggaatcatacctgtttcg 591
||||| |||||||| |||||||||| ||||| |||||| | |||||||||||||||||
Sbjct: 658 attttaggatttcgaccttcatatgctgctgtatctcatgtgggaatcatacctgtttca 717
Query: 592 aaaagtctggagactgttggttggtttgctagggatcctaatattttgcg 641
| |||| |||| ||||| ||||||||||| | |||||||||||| |||||
Sbjct: 718 acaagtttggacactgtaggttggtttgccaaggatcctaatatattgcg 767
Score = 54.0 bits (27), Expect = 3e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 23 tatgggtcttgttgggacttggtttggctggaatcttcctcatgaccagaaagctcaag 81
|||||||||||||||| || || ||||| ||||||||| || | ||||| |||||||||
Sbjct: 155 tatgggtcttgttggggctgggcttggccggaatcttcgtcctcaccaggaagctcaag 213