Miyakogusa Predicted Gene
- Lj2g3v0661400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0661400.1 NODE_72169_length_1521_cov_10.831032.path1.1
(1425 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS334510 homologue to UniRef100_Q5BGN2 Cluster: mRNA 3'... 817 0.0
gnl|LJGI|BW595241 weakly similar to UniRef100_A7PH82 Cluster: Ch... 147 2e-34
>gnl|LJGI|FS334510 homologue to UniRef100_Q5BGN2 Cluster: mRNA 3'-end-processing
protein yth1; n=1; Emericella nidulans|Rep: mRNA
3'-end-processing protein yth1 - Emericella nidulans
(Aspergillus nidulans), partial (5%)
Length = 476
Score = 817 bits (412), Expect = 0.0
Identities = 418/420 (99%)
Strand = Plus / Plus
Query: 1 atgggtacgtggaacatgcggttttctggattgcatgaagcgcggcagcatggtttagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 atgggtacgtggaacatgcggttttctggattgcatgaagcgcggcagcatggtttagtt 116
Query: 61 gcgggtcctaaatatagtcggaaagttggagcgaacgtgtttgcggttatagttgaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gcgggtcctaaatatagtcggaaagttggagcgaacgtgtttgcggttatagttgaatta 176
Query: 121 ggcttgtccaaacgaactaagggcaccgattattgcttaagcctaagagtgattgatcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ggcttgtccaaacgaactaagggcaccgattattgcttaagcctaagagtgattgatcac 236
Query: 181 acttacaatcacagtggcatggctgttaacatttttactacaaatccaattttacttcac 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 acttacaatcacagtggcgtggctgttaacatttttactacaaatccaattttacttcac 296
Query: 241 catcatgctgcgcctggagatatcatcaggctcactcaagtcactgtagatccatttaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 297 catcatgctgcgcctggagatatcatcaggctcactcaagtcactgtatatccatttaaa 356
Query: 301 gacgatttaaatcttgttttccacaaacaaatttcctcttttgctttatataaagggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gacgatttaaatcttgttttccacaaacaaatttcctcttttgctttatataaagggaaa 416
Query: 361 gatgctaataattttcacccttatcaattttcttcaaaatttatacctggagctgaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gatgctaataattttcacccttatcaattttcttcaaaatttatacctggagctgaggat 476
>gnl|LJGI|BW595241 weakly similar to UniRef100_A7PH82 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 485
Score = 147 bits (74), Expect = 2e-34
Identities = 208/252 (82%), Gaps = 3/252 (1%)
Strand = Plus / Plus
Query: 1018 actttaatgggtattctcacagactcaaaggtgacagccaaatataggtgtttggttagg 1077
||||||||||||||||||||| | |||||||||||||| ||||| | ||| ||| | |
Sbjct: 54 actttaatgggtattctcacacattcaaaggtgacagcaaaatacaagtgcatgggttga 113
Query: 1078 gtggtagcagctatgccatgccaagctgagatgctcccctgtcctgatgatgggatatac 1137
||||||||||||||||||||||||||||| ||||||| || |||||| ||||||||
Sbjct: 114 gtggtagcagctatgccatgccaagctgaaatgctccgctctcctgaca---ggatatac 170
Query: 1138 aaactgctactgaccctagaggacccaacagctaggattcgtgcacatgtatttgaaaag 1197
| ||||| ||||||||||| ||| |||||||||||||||| || | | |||| | ||
Sbjct: 171 agactgcaactgaccctaggggatccaacagctaggattcatgtatacgtatattgtgag 230
Query: 1198 gatggggagacattttttgatggttatccgagcactgatgtgttgacaagaaaactgaat 1257
|||||||||| |||||| | ||||||||||| ||||||||||| || || ||||||
Sbjct: 231 aatggggagactgtttttggttgttatccgagcgtggatgtgttgacgaggaagctgaat 290
Query: 1258 cgattacttgga 1269
| |||||||||
Sbjct: 291 aggttacttgga 302