Miyakogusa Predicted Gene
- Lj2g3v0658160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0658160.1 tr|G7KQB2|G7KQB2_MEDTR Transcriptional repressor
NF-X1-like protein OS=Medicago truncatula
GN=MTR_6g,71.3,0,ZF_PHD_2,Zinc finger, PHD-finger; ZF_RING_2,Zinc
finger, RING-type; no description,Zinc finger, NF-X,CUFF.35157.1
(3367 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63397 similar to UniRef100_A7PHC3 Cluster: Chromosome... 1526 0.0
gnl|LJGI|TC66520 similar to UniRef100_A7PHC3 Cluster: Chromosome... 212 1e-53
gnl|LJGI|TC73494 similar to UniRef100_A7PHC3 Cluster: Chromosome... 196 6e-49
gnl|LJGI|AV780269 similar to UniRef100_Q5LQ58 Cluster: Translati... 96 2e-18
gnl|LJGI|TC69021 similar to UniRef100_A7PHC3 Cluster: Chromosome... 74 6e-12
>gnl|LJGI|TC63397 similar to UniRef100_A7PHC3 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 1062
Score = 1526 bits (770), Expect = 0.0
Identities = 773/774 (99%)
Strand = Plus / Plus
Query: 2594 ggtttattgtaatatctgttacccaaaaatcaaaagccccagctcgcgtgctaggagtta 2653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggtttattgtaatatctgttacccaaaaatcaaaagccccagctcgcgtgctaggagtta 61
Query: 2654 agggcaccacaacattgaacacactctttcctcctgcatttgatcccttggtagatatgg 2713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agggcaccacaacattgaacacactctttcctcctgcatttgatcccttggtagatatgg 121
Query: 2714 accctcgacttgttgtttcatttccagacttaccaagggatgctgatattagtgctttgg 2773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 accctcgacttgttgtttcatttccagacttaccaagggatgctgatattagtgctttgg 181
Query: 2774 tgttgagatttggtggtgagtgtgagcttgtttggttgaatgacaagaatgctttagctg 2833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgttgagatttggtggtgagtgtgagcttgtttggttgaatgacaagaatgctttagctg 241
Query: 2834 tttttcacgatcctgcccgagctgcaactgcaatgaggagattggatcatggaaaagttt 2893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tttttcacgatcctgcccgagctgcaactgcaatgaggagattggatcatggaaaagttt 301
Query: 2894 atcagggcgctgtgtcagtcgtcccaaatgccggggcatcagcggcatcttcagctacca 2953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atcagggcgctgtgtcagtcgtcccaaatgccggggcatcagcggcatcttcagctacca 361
Query: 2954 atgcttggggaggaaccgggacagtgaaagagggaggagctttgactgcattgaaaggta 3013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgcttggggaggaaccgggacagtgaaagagggaggagctttgactgcattgaaaggta 421
Query: 3014 atccgtggaaaaaagctgtggttcaagaggctggtcggaaagaagattcttggggggatg 3073
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 422 atccgtggaaaaaagctgtggttcaggaggctggtcggaaagaagattcttggggggatg 481
Query: 3074 aagaatgggctactactggttctgctaatatacagccatctgttttgaagaaagcagctc 3133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aagaatgggctactactggttctgctaatatacagccatctgttttgaagaaagcagctc 541
Query: 3134 caataactgcttcactaaatcgttggaatgtcttaaaccaggaatcaagttcgagttcat 3193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 caataactgcttcactaaatcgttggaatgtcttaaaccaggaatcaagttcgagttcat 601
Query: 3194 cggttacaacaggtagagctgaagtttctgggaaacagaaagaaagcagtgctgtctcaa 3253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cggttacaacaggtagagctgaagtttctgggaaacagaaagaaagcagtgctgtctcaa 661
Query: 3254 agtcggtgtctgatgcaggtggctcaaatgaagaagggaagcaacatggagataattcag 3313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agtcggtgtctgatgcaggtggctcaaatgaagaagggaagcaacatggagataattcag 721
Query: 3314 atgcagcagaggttcctgaagtagtagatgattgggagaaggcttatgaatgag 3367
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atgcagcagaggttcctgaagtagtagatgattgggagaaggcttatgaatgag 775
>gnl|LJGI|TC66520 similar to UniRef100_A7PHC3 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 711
Score = 212 bits (107), Expect = 1e-53
Identities = 167/187 (89%)
Strand = Plus / Plus
Query: 2701 ttggtagatatggaccctcgacttgttgtttcatttccagacttaccaagggatgctgat 2760
|||||||| |||||||||||||||||||| || |||| ||| ||||| |||||||| |||
Sbjct: 6 ttggtagacatggaccctcgacttgttgtctcttttctagagttaccgagggatgcagat 65
Query: 2761 attagtgctttggtgttgagatttggtggtgagtgtgagcttgtttggttgaatgacaag 2820
|||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 66 attagtgcactggtgttgagatttggtggtgagtgtgaacttgtttggttaaataacaag 125
Query: 2821 aatgctttagctgtttttcacgatcctgcccgagctgcaactgcaatgaggagattggat 2880
||||| || ||||||||| | |||| ||||||||| ||||||||||| ||||| ||||||
Sbjct: 126 aatgcattggctgtttttaatgatcatgcccgagcggcaactgcaattaggaggttggat 185
Query: 2881 catggaa 2887
|||||||
Sbjct: 186 catggaa 192
>gnl|LJGI|TC73494 similar to UniRef100_A7PHC3 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 952
Score = 196 bits (99), Expect = 6e-49
Identities = 476/601 (79%), Gaps = 3/601 (0%)
Strand = Plus / Plus
Query: 1553 tgccctgtggaaagaaactaagatgtggccagcatgcttgtgagtcattgtgtcacagtg 1612
|||| ||||||||||| |||||||| |||||||||| ||||| || || |||||| | |
Sbjct: 127 tgccatgtggaaagaagctaagatgcggccagcatgtatgtgaatccttatgtcaccgcg 186
Query: 1613 gccattgcccaccttgtcttgaaacgatattcactgatttatcatgtgcttgtggtagga 1672
|| |||| ||||||||| ||||||| |||||||||||| | ||||||| ||||| | ||
Sbjct: 187 gctattgtccaccttgtgttgaaactatattcactgatctgacatgtgcatgtggaaaga 246
Query: 1673 cttcaattcctcctcctcttccttgtggtacaccgcctccttcatgtcagcttccttgtt 1732
||||||| |||||||| | ||||| || ||| ||| ||||||||| |||||||| || |
Sbjct: 247 cttcaatccctcctccgttgccttgcggaacaacgcttccttcatgccagcttccatgct 306
Query: 1733 cagttgctcagccgtgtggccatgcaggctctcatagttgccattttggagactgcattc 1792
| ||| ||||||| || |||| || ||| |||| ||||||| |||||| || ||
Sbjct: 307 ctgttcctcagccttgccaccatccaacctcccataactgccattgtggagattgtcctc 366
Query: 1793 cttgtccagtgccagtggctaaagaatgtattggtgggcatgtagttcttagaaatatac 1852
|||| |||||| ||| || ||||||||| |||||||||| |||||| | || || || |
Sbjct: 367 cttgcacagtgctagtagcaaaagaatgtgttggtgggcacgtagttgtcaggaacatgc 426
Query: 1853 cctgtggctcaaaggatatcagatgcaataatccatgtggaaggaccagacagtgtggtt 1912
| ||||| ||||| ||||| || |||||| | | ||||| | ||||||| |||||||||
Sbjct: 427 cttgtggttcaaaagatattaggtgcaatgagctctgtgggaagaccagaaagtgtggtt 486
Query: 1913 tacatgcatgcggcagaacatgtcaccccccaccttgtgatagtctatctggtggtgtgc 1972
||||||| || |||||| |||| ||||| |||||||||||| || || | |||
Sbjct: 487 tacatgcttgtggcagagcatgccaccctccaccttgtgatgatcactc---taccgtgg 543
Query: 1973 aaggtttccaagcaccatgtggccaaacgtgcagtgctccaaggagagactgccggcata 2032
||||| |||| | | ||||| ||||| || |||| || |||| ||||| ||||| |
Sbjct: 544 aaggtgtccatggttcttgtgggcaaacatgtggtgcccctaggaaggactgtcggcaca 603
Query: 2033 catgtatggctccatgccacccttcatctccttgccctgatataaaatgtgaattccctg 2092
||||| |||||||| |||||||||||||| || || ||||| | ||| |||| | |
Sbjct: 604 tgtgtatagctccatgtcacccttcatctccatgtccagatatcatatgccaatttcagg 663
Query: 2093 ttacaatcacttgttcttgtggccgtataacagcaagtgttccttgtgatgctggtggta 2152
| ||||| |||||||||||||||| |||||||||| |||||||||||| || |||||||
Sbjct: 664 tcacaattgcttgttcttgtggccgaataacagcaaatgttccttgtgacgcgggtggta 723
Query: 2153 g 2153
|
Sbjct: 724 g 724
>gnl|LJGI|AV780269 similar to UniRef100_Q5LQ58 Cluster: Translation initiation factor
IF-3; n=1; Silicibacter pomeroyi|Rep: Translation
initiation, partial (10%)
Length = 514
Score = 95.6 bits (48), Expect = 2e-18
Identities = 68/72 (94%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 3153 tcgttggaatgtcttaaaccaggaatcaagttcgagttcat-cggttacaacaggt-aga 3210
||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |||
Sbjct: 514 tcgttggaatgtcttaaaccaggcatcaagttcgagttcatgcggttacgacaggtcaga 455
Query: 3211 gctgaagtttct 3222
||||||||||||
Sbjct: 454 gctgaagtttct 443
>gnl|LJGI|TC69021 similar to UniRef100_A7PHC3 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 704
Score = 73.8 bits (37), Expect = 6e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 745 gaggatgatctttgccctcatgtttgtgtcttgcaatgccatccaggtccttgccctcct 804
|||||| |||||||||||||| |||| |||||||||||||| || ||||| |||||||||
Sbjct: 641 gaggatcatctttgccctcatctttgcgtcttgcaatgccaccccggtccatgccctcct 700
Query: 805 t 805
|
Sbjct: 701 t 701
Score = 71.9 bits (36), Expect = 2e-11
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 615 ggagattaggtatgtttgcttttgtgggaagaggccagaccctccttctgatttatatct 674
|||||| || ||||||||||| ||||| |||| |||||||| || | ||| || |||||
Sbjct: 511 ggagatcagctatgtttgcttctgtggaaagataccagacccaccatgtgacttttatct 570
Query: 675 gacaccgcattcttgtggggagccgtgtgggaagcctctt 714
||||||||||| ||||| || || |||||||||||||||
Sbjct: 571 cacaccgcattcatgtggagaaccatgtgggaagcctctt 610
Score = 63.9 bits (32), Expect = 6e-09
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 414 tgtggaatgcatgatttgctatgacatggttgggaggtctgcggctatttggtcttgctc 473
|||||||||||||||||||||||||| |||| | |||||||| | | ||||| |||||
Sbjct: 316 tgtggaatgcatgatttgctatgacaaggtttgcaggtctgctccagtctggtcatgctc 375
Query: 474 gagctgctactcaatttttcacct 497
|| |||||||| || ||||||||
Sbjct: 376 cagttgctactccatatttcacct 399