Miyakogusa Predicted Gene

Lj2g3v0636940.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0636940.1 Non Chatacterized Hit- tr|I1K9M5|I1K9M5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49611
PE,23.01,4e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.35140.1
         (1510 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024040 similar to UniRef100_A7R8D4 Cluster: Chromosom...   153   4e-36

>gnl|LJGI|GO024040 similar to UniRef100_A7R8D4 Cluster: Chromosome undetermined
           scaffold_2463, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_2463,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (8%)
          Length = 672

 Score =  153 bits (77), Expect = 4e-36
 Identities = 148/171 (86%), Gaps = 3/171 (1%)
 Strand = Plus / Plus

                                                                       
Query: 204 tgagcagatgagacaggattcatgtgaatgcaaagatactgtctttgcttctgctattaa 263
           |||| |||||||| | ||||||||||||||||||||| | |||||||  |||||||||||
Sbjct: 416 tgagaagatgagagatgattcatgtgaatgcaaagattcagtctttgtgtctgctattaa 475

                                                                       
Query: 264 catatatgccaatgcagggctggttgatgaagcaatcactttgtttaagaacattcctca 323
            |||||||| || ||||||||||| |||||||||||| || | |||||||||||||||||
Sbjct: 476 gatatatgcaaaagcagggctggtagatgaagcaatctctctctttaagaacattcctca 535

                                                              
Query: 324 gtttaattgtgtgaac---tggacacaatccttcaatacccttttgcaaat 371
           |||||| ||||||| |   |||||  |||||||||||||| | ||||||||
Sbjct: 536 gtttaactgtgtgagctgttggactgaatccttcaataccttgttgcaaat 586