Miyakogusa Predicted Gene

Lj2g3v0636830.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0636830.1 Non Chatacterized Hit- tr|C6SZ62|C6SZ62_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9639
PE=,91.71,0,Ssu72,RNA polymerase II subunit A; FAMILY NOT NAMED,RNA
polymerase II subunit A; seg,NULL,CUFF.35122.1
         (585 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61637 similar to UniRef100_A7PG19 Cluster: Chromosome...  1160   0.0  

>gnl|LJGI|TC61637 similar to UniRef100_A7PG19 Cluster: Chromosome chr6 scaffold_15,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_15, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 906

 Score = 1160 bits (585), Expect = 0.0
 Identities = 585/585 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagtttcgttacgcaatggtgtgttcttcgaaccagaaccgaagcatggaagctcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atgaagtttcgttacgcaatggtgtgttcttcgaaccagaaccgaagcatggaagctcac 247

                                                                       
Query: 61  ttcctcctcaagagacagggctttgatgtgtgttcttacggcacaggtgcccacgttaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttcctcctcaagagacagggctttgatgtgtgttcttacggcacaggtgcccacgttaag 307

                                                                       
Query: 121 ctccctggtccttccctcagagaacccaatgtctatgacttcggaactccctacaagcac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctccctggtccttccctcagagaacccaatgtctatgacttcggaactccctacaagcac 367

                                                                       
Query: 181 atgctcgatgaccttcgcagaaaggaccctgaactctacaagcgaaatggaatattgccg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atgctcgatgaccttcgcagaaaggaccctgaactctacaagcgaaatggaatattgccg 427

                                                                       
Query: 241 atgctcaaaagaaactcaaacgtcaaattggcacctcaaagatggcaagaaaatgcagct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atgctcaaaagaaactcaaacgtcaaattggcacctcaaagatggcaagaaaatgcagct 487

                                                                       
Query: 301 gatggctcctttgatatagtgttcacatttgaagaaaaagtattcgatatggttattgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gatggctcctttgatatagtgttcacatttgaagaaaaagtattcgatatggttattgaa 547

                                                                       
Query: 361 gatctgcataatagagatcatgttttactgaaaactgtgctggtaatcaacttagaggtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gatctgcataatagagatcatgttttactgaaaactgtgctggtaatcaacttagaggtg 607

                                                                       
Query: 421 aaggataaccatgaggaagcagctgtaggagcaaggcttactttagatctatgccaggag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aaggataaccatgaggaagcagctgtaggagcaaggcttactttagatctatgccaggag 667

                                                                       
Query: 481 attgaagctgctgaatcttgggaggagtccattgatgacattattggtggttttgagaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 attgaagctgctgaatcttgggaggagtccattgatgacattattggtggttttgagaag 727

                                                        
Query: 541 cagcaccggcggaagcttttgtacagcatctccttctactaaaat 585
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cagcaccggcggaagcttttgtacagcatctccttctactaaaat 772