Miyakogusa Predicted Gene
- Lj2g3v0635710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0635710.1 Non Chatacterized Hit- tr|B9RFL4|B9RFL4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,32.89,0.00000000000003,Agenet,Agenet-like domain; Tudor-like domain
present in plant sequences,Tudor-like, plant,CUFF.35056.1
(577 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75155 similar to UniRef100_A4BMW8 Cluster: Permease Y... 781 0.0
gnl|LJGI|TC68691 homologue to UniRef100_Q0I6L2 Cluster: Ribonucl... 100 2e-20
>gnl|LJGI|TC75155 similar to UniRef100_A4BMW8 Cluster: Permease YjgP/YjgQ; n=1;
Nitrococcus mobilis Nb-231|Rep: Permease YjgP/YjgQ -
Nitrococcus mobilis Nb-231, partial (5%)
Length = 1291
Score = 781 bits (394), Expect = 0.0
Identities = 440/454 (96%), Gaps = 1/454 (0%)
Strand = Plus / Plus
Query: 119 aggagctgttcagaataggcgacttggttgaggtttccagt-aaggtgaagggttatcga 177
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 488 aggagctgttcagaataggcgacttggttgaggtttccagtgaaggtggagggttatcga 547
Query: 178 ggaacttggtttcttgccgaagttgttgagctaaaggtacaaggaaagttccttgttgag 237
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ggagcttggtttcttgccgaagttgttgagctaaaggtacaaggaaagttccttgttgag 607
Query: 238 cacaagcatcggctgcatgatgtaactggaaagcttttgaaagagaagattgatgacgat 297
|||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| |||
Sbjct: 608 cacaagcatctgctgcatgatgtaactggaaagcttttggaagagaaggttgatgatgat 667
Query: 298 cacataaggcctcttccgcccaatgcactgaatacacatcgtgattttgatgcttggaaa 357
||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 668 cacataaggcctcttccgcccaatgcactgagttcaaatcgtgattttgatgcttggaaa 727
Query: 358 gttggtgatcctaatgctaaatataaactactggatagagttgatgctcagtaccttgaa 417
||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 728 attggtgatcctgatgctaaatataaactactggatagagttgatgctcagtgctttgaa 787
Query: 418 ggctggagtgttgctatgattcgaaaggttcatggaaataacacatatgacgtttggttg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ggctggagtgttgctatgattcgaaaggttcatggaaataacacatatgacgtttggttg 847
Query: 478 gagggcgacccacaaccattggatggtctcaccccctcccagttaaggcggcattacgac 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gagggcgacccacaaccattggatggtctcaccccctcccagttaaggcggcattacgac 907
Query: 538 agggctggttgcgattgggacgtagcttctcagg 571
||||||||||||||||||||||||||||||||||
Sbjct: 908 agggctggttgcgattgggacgtagcttctcagg 941
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 atgatcattgggagccaccaatccaacaacaaaagcagg 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgatcattgggagccaccaatccaacaacaaaagcagg 490
>gnl|LJGI|TC68691 homologue to UniRef100_Q0I6L2 Cluster: Ribonuclease H; n=1;
Synechococcus sp. CC9311|Rep: Ribonuclease H -
Synechococcus sp. (strain CC9311), partial (6%)
Length = 1415
Score = 99.6 bits (50), Expect = 2e-20
Identities = 95/110 (86%)
Strand = Plus / Plus
Query: 119 aggagctgttcagaataggcgacttggttgaggtttccagtaaggtgaagggttatcgag 178
||||| |||| |||| ||||||| |||||||||||||||| | ||| | ||||||| ||
Sbjct: 641 aggagttgtttagaaagggcgactgggttgaggtttccagtgacgtggacggttatctag 700
Query: 179 gaacttggtttcttgccgaagttgttgagctaaaggtacaaggaaagttc 228
||||||||||||||| |||||||||||| ||| ||||||||| ||||||
Sbjct: 701 aaacttggtttcttgctgaagttgttgaggtaagggtacaagggaagttc 750