Miyakogusa Predicted Gene
- Lj2g3v0635700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0635700.1 Non Chatacterized Hit- tr|J3M3P6|J3M3P6_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G1,28.4,1e-18,Tudor-like domain present in plant
sequences,Tudor-like, plant; Agenet,Agenet-like domain;
SUBFAMILY,CUFF.35054.1
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75155 similar to UniRef100_A4BMW8 Cluster: Permease Y... 1766 0.0
gnl|LJGI|TC68691 homologue to UniRef100_Q0I6L2 Cluster: Ribonucl... 111 8e-24
>gnl|LJGI|TC75155 similar to UniRef100_A4BMW8 Cluster: Permease YjgP/YjgQ; n=1;
Nitrococcus mobilis Nb-231|Rep: Permease YjgP/YjgQ -
Nitrococcus mobilis Nb-231, partial (5%)
Length = 1291
Score = 1766 bits (891), Expect = 0.0
Identities = 937/951 (98%), Gaps = 1/951 (0%)
Strand = Plus / Plus
Query: 8 tttcacattcccgcaatccctttcactgcgtgcgagccctaaaagcgatgtccgcttcac 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 tttcacattcccgcaatccctttcactgcgtgcgagccctaaaagcgatgtccgcttcac 79
Query: 68 cctacctggaacctgacgcggaggtggaattttgttccgaaatcgccggccagcgctcct 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 cctacctggaacctgacgcggaggtggaattttgttccgaaatcgccggccagcgctcct 139
Query: 128 ggtccatcggcaagatcgtcagcaggcccagcttctcccccgaccatgtcttggtagagt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ggtccatcggcaagatcgtcagcaggcccagcttctcccccgaccatgtcttggtagagt 199
Query: 188 acgactacgagcaagacaccaatcccaagacacaatccgtgagcattgacaaggtccggc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acgactacgagcaagacaccaatcccaagacacaatccgtgagcattgacaaggtccggc 259
Query: 248 cacgccctccgccggagacccaccatgacttcaagatcggcgacaaggtggacgcctacg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cacgccctccgccggagacccaccatgacttcaagatcggcgacaaggtggacgcctacg 319
Query: 308 acaagggcagctggagggagggacacctagtcaaagaattagaagatggcaagttcgctg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acaagggcagctggagggagggacacctagtcaaagaattagaagatggcaagttcgctg 379
Query: 368 tggatttcaatcttcccaagcagttaaacgagtttcccaaagagaatctcaggacccacc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggatttcaatcttcccaagcagttaaacgagtttcccaaagagaatctcaggacccacc 439
Query: 428 gcgaatggatcgatgatcattgggagccaccaatccaacaacaaaagcaggagctgttca 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcgaatggatcgatgatcattgggagccaccaatccaacaacaaaagcaggagctgttca 499
Query: 488 gaataggcgacttggttgaggtttccagt-aaggtgaagggttatcgaggaacttggttt 546
||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||
Sbjct: 500 gaataggcgacttggttgaggtttccagtgaaggtggagggttatcgaggagcttggttt 559
Query: 547 cttgccgaagttgttgagctaaaggtacaaggaaagttccttgttgagcacaagcatcgg 606
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 560 cttgccgaagttgttgagctaaaggtacaaggaaagttccttgttgagcacaagcatctg 619
Query: 607 ctgcatgatgtaactggaaagcttttgaaagagaagattgatgacgatcacataaggcct 666
||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||
Sbjct: 620 ctgcatgatgtaactggaaagcttttggaagagaaggttgatgatgatcacataaggcct 679
Query: 667 cttccgcccaatgcactgaatacacatcgtgattttgatgcttggaaagttggtgatcct 726
||||||||||||||||||| | || ||||||||||||||||||||||| |||||||||||
Sbjct: 680 cttccgcccaatgcactgagttcaaatcgtgattttgatgcttggaaaattggtgatcct 739
Query: 727 aatgctaaatataaactactggatagagttgatgctcagtaccttgaaggctggagtgtt 786
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 740 gatgctaaatataaactactggatagagttgatgctcagtgctttgaaggctggagtgtt 799
Query: 787 gctatgattcgaaaggttcatggaaataacacatatgacgtttggttggagggcgaccca 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gctatgattcgaaaggttcatggaaataacacatatgacgtttggttggagggcgaccca 859
Query: 847 caaccattggatggtctcaccccctcccagttaaggcggcattacgacagggctggttgc 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 caaccattggatggtctcaccccctcccagttaaggcggcattacgacagggctggttgc 919
Query: 907 gattgggacgtagcttctcagggcagcagctatagctctgatgattagtaa 957
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 gattgggacgtagcttctcagggcagcagctatagctctgatgattagtaa 970
>gnl|LJGI|TC68691 homologue to UniRef100_Q0I6L2 Cluster: Ribonuclease H; n=1;
Synechococcus sp. CC9311|Rep: Ribonuclease H -
Synechococcus sp. (strain CC9311), partial (6%)
Length = 1415
Score = 111 bits (56), Expect = 8e-24
Identities = 160/196 (81%), Gaps = 9/196 (4%)
Strand = Plus / Plus
Query: 399 gtttcccaaagagaatctcaggacccaccgcgaatggatcgatgatcattgggagccacc 458
||||||||| ||||| |||||| | |||| |||||||||||||| ||||||| ||| ||
Sbjct: 555 gtttcccaatgagaagctcagggcgcaccatgaatggatcgatgaccattgggggcctcc 614
Query: 459 aatccaacaacaaaag---------caggagctgttcagaataggcgacttggttgaggt 509
|| ||||||| |||| |||||| |||| |||| ||||||| |||||||||
Sbjct: 615 aacacaacaaccaaagaaggcggaacaggagttgtttagaaagggcgactgggttgaggt 674
Query: 510 ttccagtaaggtgaagggttatcgaggaacttggtttcttgccgaagttgttgagctaaa 569
||||||| | ||| | ||||||| || ||||||||||||||| |||||||||||| |||
Sbjct: 675 ttccagtgacgtggacggttatctagaaacttggtttcttgctgaagttgttgaggtaag 734
Query: 570 ggtacaaggaaagttc 585
||||||||| ||||||
Sbjct: 735 ggtacaagggaagttc 750
Score = 103 bits (52), Expect = 2e-21
Identities = 97/112 (86%)
Strand = Plus / Plus
Query: 195 cgagcaagacaccaatcccaagacacaatccgtgagcattgacaaggtccggccacgccc 254
|||||||| |||||||||| | | ||| ||||||||||||||| |||||||||||||
Sbjct: 348 cgagcaaggcaccaatccccgggtagaattcgtgagcattgacaatctccggccacgccc 407
Query: 255 tccgccggagacccaccatgacttcaagatcggcgacaaggtggacgcctac 306
||||| | || ||||||||||||||||| |||||||||||||||| |||||
Sbjct: 408 tccgctgaagccccaccatgacttcaagtccggcgacaaggtggacacctac 459
Score = 60.0 bits (30), Expect = 3e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 917 tagcttctcagggcagcagctatagctctgatga 950
||||||||||||||||||||| ||||||||||||
Sbjct: 1106 tagcttctcagggcagcagctgtagctctgatga 1139