Miyakogusa Predicted Gene

Lj2g3v0633870.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0633870.2 Non Chatacterized Hit- tr|G7JP36|G7JP36_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,82.12,0,NRDE-2,siRNA-mediated silencing protein NRDE-2; HAT
(Half-A-TPR) repeats,RNA-processing protein, HAT,CUFF.34985.2
         (1779 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72794 similar to UniRef100_A7QW89 Cluster: Chromosome...   942   0.0  

>gnl|LJGI|TC72794 similar to UniRef100_A7QW89 Cluster: Chromosome undetermined
            scaffold_200, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_200, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (12%)
          Length = 488

 Score =  942 bits (475), Expect = 0.0
 Identities = 478/479 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1063 ggtatgataaatgaccactctgttgctctagtatgttcggctgcattgtttgaagagcta 1122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10   ggtatgataaatgaccactctgttgctctagtatgttcggctgcattgtttgaagagcta 69

                                                                        
Query: 1123 actaccggatgggaagcgggcattgaagtattggatcaagcttttgcagcggtgcttcca 1182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70   actaccggatgggaagcgggcattgaagtattggatcaagcttttgcagcggtgcttcca 129

                                                                        
Query: 1183 gaaaggagaagcattagttatcaacttgaatttttgtttaactactacataaggatactt 1242
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 130  gaaaggagaagcattagttatcaacttgaatttttgtttaactacttcataaggatactt 189

                                                                        
Query: 1243 cggagacatcagaggcaatcaagcctgttaaaagtttgggagtccatctctcagggcctc 1302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190  cggagacatcagaggcaatcaagcctgttaaaagtttgggagtccatctctcagggcctc 249

                                                                        
Query: 1303 cagatatatcccttcagtccagaacttctaaaaggtgttgtggaggttggccattttcac 1362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250  cagatatatcccttcagtccagaacttctaaaaggtgttgtggaggttggccattttcac 309

                                                                        
Query: 1363 acaacatctaatagattgcggcggattctagatgactgttgttacaagaaaccatctgta 1422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310  acaacatctaatagattgcggcggattctagatgactgttgttacaagaaaccatctgta 369

                                                                        
Query: 1423 cttgtctggctttttacattatcatatgagatgtctagaggtggctcacaccacagaatc 1482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370  cttgtctggctttttacattatcatatgagatgtctagaggtggctcacaccacagaatc 429

                                                                       
Query: 1483 cgtgggttgttcgaaagagcactgggtaatgacaggctttgcagctcagttgtactgtg 1541
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430  cgtgggttgttcgaaagagcactgggtaatgacaggctttgcagctcagttgtactgtg 488