Miyakogusa Predicted Gene

Lj2g3v0632710.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0632710.1 Non Chatacterized Hit- tr|F6STJ7|F6STJ7_MONDO
Uncharacterized protein OS=Monodelphis domestica
GN=TN,33.8,0.32,seg,NULL,CUFF.34955.1
         (348 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO021514 homologue to UniRef100_A7RTG7 Cluster: Predict...   371   e-102

>gnl|LJGI|GO021514 homologue to UniRef100_A7RTG7 Cluster: Predicted protein; n=1;
           Nematostella vectensis|Rep: Predicted protein -
           Nematostella, partial (1%)
          Length = 258

 Score =  371 bits (187), Expect = e-102
 Identities = 215/224 (95%), Gaps = 2/224 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagaagaggcaaaatatgttgaaggatactatcatactggcattgacaatatctctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35  atgaagaagaggcaaaatatgttgaaggatactatcatactggcattgacaatatctctg 94

                                                                       
Query: 61  tgtttctccttttcttcaatagaggctaggagtatacaaacatttcagagcggtttgaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  tgtttctccttttcttcaatagaggctaggagtatacaaacatttcagagcggtttgaat 154

                                                                       
Query: 121 tctggtattttatcaacaactcatggaggccatggagaatcagacactcgatctccnnnn 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 155 tctggtattttatcaacaactcatggaggccatggagaatcagacactcgatctcctttt 214

                                                       
Query: 181 nnncatacgttaccaaaatgtattcctattcctccatctggccc 224
              | ||||||||||||||| |||||||||||||||||||||||
Sbjct: 215 tttc-tacgttaccaaaatg-attcctattcctccatctggccc 256