Miyakogusa Predicted Gene
- Lj2g3v0632430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0632430.1 Non Chatacterized Hit- tr|I1L3Z2|I1L3Z2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52551
PE,88.58,0,Pyridoxal_deC,Pyridoxal phosphate-dependent decarboxylase;
seg,NULL; PLP-dependent transferases,Pyri,CUFF.34938.1
(1503 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP055630 similar to UniRef100_P54767 Cluster: Glutamate... 710 0.0
gnl|LJGI|TC59495 UniRef100_Q684J8 Cluster: Glutamate decarboxyla... 202 5e-51
gnl|LJGI|TC57138 homologue to UniRef100_A8C8H3 Cluster: Glutamat... 202 5e-51
gnl|LJGI|TC69785 similar to UniRef100_Q6Q4I2 Cluster: Glutamate ... 64 3e-09
>gnl|LJGI|BP055630 similar to UniRef100_P54767 Cluster: Glutamate decarboxylase; n=1;
Solanum lycopersicum|Rep: Glutamate decarboxylase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum),
partial (16%)
Length = 546
Score = 710 bits (358), Expect = 0.0
Identities = 358/358 (100%)
Strand = Plus / Minus
Query: 1146 tttgaaagacagcagcctgcacacagtgtttgagatagcagaccatctgaggaaattcgg 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tttgaaagacagcagcctgcacacagtgtttgagatagcagaccatctgaggaaattcgg 487
Query: 1206 gtggatagttccggcctacacaatgccgccggatgctcaacacattgctgtcctcagggt 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtggatagttccggcctacacaatgccgccggatgctcaacacattgctgtcctcagggt 427
Query: 1266 ggtgatcagggaggatttcagccgcagcttggcggagagactagttgctgacatagacag 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ggtgatcagggaggatttcagccgcagcttggcggagagactagttgctgacatagacag 367
Query: 1326 ggttgtgaaactcttggacacacttccaagccctctttccaccaaaggtgcccatgtcac 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggttgtgaaactcttggacacacttccaagccctctttccaccaaaggtgcccatgtcac 307
Query: 1386 agctatcaagagtgagacaagtgagaaggttaaaaagaatgtgatagatactcaagcaga 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agctatcaagagtgagacaagtgagaaggttaaaaagaatgtgatagatactcaagcaga 247
Query: 1446 gatttccaagtactggaagagacttgtggatggtaagaaagttggaccatgctaggct 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gatttccaagtactggaagagacttgtggatggtaagaaagttggaccatgctaggct 189
>gnl|LJGI|TC59495 UniRef100_Q684J8 Cluster: Glutamate decarboxylase 1; n=1; Lotus
japonicus|Rep: Glutamate decarboxylase 1 - Lotus
japonicus, partial (57%)
Length = 800
Score = 202 bits (102), Expect = 5e-51
Identities = 126/134 (94%)
Strand = Plus / Plus
Query: 193 tcatttgtgaccacttggatggagcctgagtgtgataagctcatcatggcttcacttaac 252
||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 262 tcatttgtgaccacttggatggagcctgagtgtgacaagctcatcatggcttccattaac 321
Query: 253 aagaactatgttgacatggatgagtaccctgtcaccaccgagctccagaatcggtgtgtt 312
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 322 aagaactatgttgacatggatgagtaccctgttaccaccgagcttcagaatcggtgtgtg 381
Query: 313 aatataatagcaca 326
|| || ||||||||
Sbjct: 382 aacatgatagcaca 395
>gnl|LJGI|TC57138 homologue to UniRef100_A8C8H3 Cluster: Glutamate decarboxylase;
n=1; Glycine max|Rep: Glutamate decarboxylase - Glycine
max (Soybean), partial (96%)
Length = 1776
Score = 202 bits (102), Expect = 5e-51
Identities = 126/134 (94%)
Strand = Plus / Plus
Query: 193 tcatttgtgaccacttggatggagcctgagtgtgataagctcatcatggcttcacttaac 252
||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 241 tcatttgtgaccacttggatggagcctgagtgtgacaagctcatcatggcttccattaac 300
Query: 253 aagaactatgttgacatggatgagtaccctgtcaccaccgagctccagaatcggtgtgtt 312
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 301 aagaactatgttgacatggatgagtaccctgttaccaccgagcttcagaatcggtgtgtg 360
Query: 313 aatataatagcaca 326
|| || ||||||||
Sbjct: 361 aacatgatagcaca 374
Score = 159 bits (80), Expect = 6e-38
Identities = 461/588 (78%)
Strand = Plus / Plus
Query: 464 atgataagcccaacatagttactggggctaatgtgcaggtttgttgggaaaaatttgcga 523
|||| ||||||||||| || || || || || || |||||||| ||||| |||||||| |
Sbjct: 503 atgacaagcccaacattgtcaccggagccaacgttcaggtttgctgggagaaatttgcaa 562
Query: 524 ggtacttcgaggttgagctcaaggaagtgaaactcacagagggatgctatgtgatggacc 583
| ||||| ||||| ||| | || || ||||| || | ||||||| |||||| |||||||
Sbjct: 563 gatactttgaggtggagttgaaagaggtgaagctgagtgagggatactatgtaatggacc 622
Query: 584 ctgtgaaagctgttgaaatggtagatgagaagaccatctgtgttgcagccatcttgggat 643
|| || ||||| || ||||||||||||| ||||| |||||||| || || | || |
Sbjct: 623 ctcaaaaggctgtggatttggtagatgagaacaccatttgtgttgctgctattcttggtt 682
Query: 644 caactctgaccggcgagtttgaggatgtgaagcttcttaacgaacttcttactaaaaaga 703
| || | | || |||||||| ||||| |||| | || || ||||| | | ||||||
Sbjct: 683 ccacattaaatggagagtttgaagatgtcaagcgcttaaatgatcttctaattgaaaaga 742
Query: 704 acaaggagactggattggatgtcccaattcatgtagatgctgcaagtggggggtttattg 763
||||||| ||||||| ||| || |||||||| ||||| || ||||| || || ||||
Sbjct: 743 acaaggaaactggatgggacactcctattcatgttgatgcagctagtggcggcttcattg 802
Query: 764 ccccatttctataccctgatctagagtgggattttcgtttgccattggtgaagagcatca 823
|||| ||| | || || || || |||||||| ||||| || ||| | |||||||||||||
Sbjct: 803 ccccgtttatttatccagagcttgagtgggactttcgcttaccactagtgaagagcatca 862
Query: 824 acgttagcggtcacaagtatggtcttgtctacgccggtattggttgggttgtctggagga 883
||||||| || |||||||||||||| ||||| || || |||||||||||| ||||||| |
Sbjct: 863 acgttagtggccacaagtatggtctagtctatgctggaattggttgggttatctggagaa 922
Query: 884 gtaaagatgacttgccggatgatcttgtttttcacataaattatcttggatctgatcagc 943
|| || |||||||| || || || | || || || || ||||| ||| ||||||| |
Sbjct: 923 acaaggaggacttgcctgaggaactcatcttccatatcaactatctcggagctgatcaac 982
Query: 944 ctactttcacattgaatttctccaaaggatctagtcaaatcattgctcaatattaccaat 1003
| || ||||| | || ||||||||||| ||||| |||||||| |||||||| ||||||
Sbjct: 983 ccaccttcaccctcaacttctccaaaggttctagccaaatcatagctcaatactaccaac 1042
Query: 1004 tcatacggcttggctttgagggttataaaaatgtcatggaaaattgca 1051
| || || ||||| | |||||| |||||| |||| |||||||| ||||
Sbjct: 1043 taattcgccttggttatgagggctataaacatgtgatggaaaactgca 1090
>gnl|LJGI|TC69785 similar to UniRef100_Q6Q4I2 Cluster: Glutamate decarboxylase 4a;
n=1; Brassica juncea|Rep: Glutamate decarboxylase 4a -
Brassica juncea (Leaf mustard) (Indian mustard), partial
(43%)
Length = 814
Score = 63.9 bits (32), Expect = 3e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 250 aacaagaactatgttgacatggatgagtaccctgtcaccaccgagctccagaatcggtgt 309
|||||||||||||| ||||||||||||||||||| ||||| || || || ||||| |||
Sbjct: 367 aacaagaactatgtagacatggatgagtaccctgctaccactgatcttcataatcgatgt 426
Query: 310 gttaatataatagcac 325
|| || || |||||||
Sbjct: 427 gtaaacatgatagcac 442
Score = 63.9 bits (32), Expect = 3e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 454 ggcaagccatatgataagcccaacatagttactggggctaatgtgcaggtttgttgggaa 513
|||||||| ||||||||||||||||| || || || || ||||||||||| |||||| |
Sbjct: 571 ggcaagccctatgataagcccaacattgtcacaggtgccaatgtgcaggtatgttggaag 630
Query: 514 aaatttgc 521
||||||||
Sbjct: 631 aaatttgc 638