Miyakogusa Predicted Gene
- Lj2g3v0632400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0632400.1 Non Chatacterized Hit- tr|I1L3Y8|I1L3Y8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2358
PE=,78.49,0,cAMP-binding domain-like,Cyclic nucleotide-binding-like;
Voltage-gated potassium channels,NULL; seg,,CUFF.34980.1
(2307 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78200 similar to UniRef100_A9CRE4 Cluster: Cyclic nuc... 745 0.0
gnl|LJGI|BP052112 similar to UniRef100_A9CRE4 Cluster: Cyclic nu... 412 e-114
gnl|LJGI|GO010489 similar to UniRef100_A7QJZ3 Cluster: Chromosom... 398 e-110
gnl|LJGI|TC78526 similar to UniRef100_A9CRE4 Cluster: Cyclic nuc... 262 9e-69
gnl|LJGI|BP080087 homologue to UniRef100_A7QJZ5 Cluster: Chromos... 84 4e-15
>gnl|LJGI|TC78200 similar to UniRef100_A9CRE4 Cluster: Cyclic nucleotide gated channel;
n=1; Malus x domestica|Rep: Cyclic nucleotide gated
channel - Malus domestica (Apple) (Malus sylvestris),
partial (24%)
Length = 1320
Score = 745 bits (376), Expect = 0.0
Identities = 376/376 (100%)
Strand = Plus / Plus
Query: 1828 gatgccattcgtgagagactaaaacagaagacatacatcaaaggaagtagaattttgact 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatgccattcgtgagagactaaaacagaagacatacatcaaaggaagtagaattttgact 61
Query: 1888 aggggtggtcttgtagagaagatggtctttgttgtgcgtggaaaattagagagcatcgga 1947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aggggtggtcttgtagagaagatggtctttgttgtgcgtggaaaattagagagcatcgga 121
Query: 1948 gaagatggaattggagttccattatcggaaggggatgcttgtggtgaagaacttctcaca 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaagatggaattggagttccattatcggaaggggatgcttgtggtgaagaacttctcaca 181
Query: 2008 tggtatcttgaacattcttctgtaagcaaagatggtaaaaaagtaaggcttccaggacag 2067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tggtatcttgaacattcttctgtaagcaaagatggtaaaaaagtaaggcttccaggacag 241
Query: 2068 aggttgcagagcaacagaacagtaaaatgcttaacaaatgtggagggattttcactccgt 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggttgcagagcaacagaacagtaaaatgcttaacaaatgtggagggattttcactccgt 301
Query: 2128 gctgcagatcttgaagaagtaacaattcttttcacaagattcttgcggagccctcaagtc 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gctgcagatcttgaagaagtaacaattcttttcacaagattcttgcggagccctcaagtc 361
Query: 2188 caaggagctttaaggt 2203
||||||||||||||||
Sbjct: 362 caaggagctttaaggt 377
Score = 214 bits (108), Expect = 2e-54
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 2200 aggtatgattcaccttactggagatcccttgcagcaaacagaattcaggttgcatggaga 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aggtatgattcaccttactggagatcccttgcagcaaacagaattcaggttgcatggaga 745
Query: 2260 tacaggaagaaacgtctaagtcgtgctaatacctcacaagggctttga 2307
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tacaggaagaaacgtctaagtcgtgctaatacctcacaagggctttga 793
>gnl|LJGI|BP052112 similar to UniRef100_A9CRE4 Cluster: Cyclic nucleotide gated channel;
n=1; Malus x domestica|Rep: Cyclic nucleotide gated
channel - Malus domestica (Apple) (Malus sylvestris),
partial (21%)
Length = 553
Score = 412 bits (208), Expect = e-114
Identities = 348/395 (88%)
Strand = Plus / Minus
Query: 1901 tagagaagatggtctttgttgtgcgtggaaaattagagagcatcggagaagatggaattg 1960
||||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||||| |
Sbjct: 530 tagagaagatggtatttgtggtgcgtggaaaattggagagcattggagaggatggaacta 471
Query: 1961 gagttccattatcggaaggggatgcttgtggtgaagaacttctcacatggtatcttgaac 2020
|| | |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||
Sbjct: 470 gaatgccattatctgaaggggacgcttgtggtgaagaacttatgacatggtatcttgaac 411
Query: 2021 attcttctgtaagcaaagatggtaaaaaagtaaggcttccaggacagaggttgcagagca 2080
|||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||
Sbjct: 410 attcttctgtaagctcagatggtagaaaagtaaggcttcctggacagaggttggttagca 351
Query: 2081 acagaacagtaaaatgcttaacaaatgtggagggattttcactccgtgctgcagatcttg 2140
|||| |||||||| ||||| ||||||||||||| |||||||||| ||| || || ||||
Sbjct: 350 acaggacagtaaagtgcttgacaaatgtggaggcattttcactctctgccgccgaccttg 291
Query: 2141 aagaagtaacaattcttttcacaagattcttgcggagccctcaagtccaaggagctttaa 2200
||||||| || || ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 290 aagaagtcacgatacttttcacaagattcttgcggagccctcaggtccaaggagctttaa 231
Query: 2201 ggtatgattcaccttactggagatcccttgcagcaaacagaattcaggttgcatggagat 2260
||||||| || ||||| |||||||||||||| || ||| | ||||| |||||||||||||
Sbjct: 230 ggtatgaatcgccttattggagatcccttgccgcnaaccgcattcaagttgcatggagat 171
Query: 2261 acaggaagaaacgtctaagtcgtgctaatacctca 2295
| || |||||||||| ||||||| |||| |||||
Sbjct: 170 atagacagaaacgtctgagtcgtgttaattcctca 136
>gnl|LJGI|GO010489 similar to UniRef100_A7QJZ3 Cluster: Chromosome undetermined
scaffold_109, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_109, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(28%)
Length = 537
Score = 398 bits (201), Expect = e-110
Identities = 201/201 (100%)
Strand = Plus / Plus
Query: 2107 gtggagggattttcactccgtgctgcagatcttgaagaagtaacaattcttttcacaaga 2166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtggagggattttcactccgtgctgcagatcttgaagaagtaacaattcttttcacaaga 61
Query: 2167 ttcttgcggagccctcaagtccaaggagctttaaggtatgattcaccttactggagatcc 2226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttcttgcggagccctcaagtccaaggagctttaaggtatgattcaccttactggagatcc 121
Query: 2227 cttgcagcaaacagaattcaggttgcatggagatacaggaagaaacgtctaagtcgtgct 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cttgcagcaaacagaattcaggttgcatggagatacaggaagaaacgtctaagtcgtgct 181
Query: 2287 aatacctcacaagggctttga 2307
|||||||||||||||||||||
Sbjct: 182 aatacctcacaagggctttga 202
>gnl|LJGI|TC78526 similar to UniRef100_A9CRE4 Cluster: Cyclic nucleotide gated channel;
n=1; Malus x domestica|Rep: Cyclic nucleotide gated
channel - Malus domestica (Apple) (Malus sylvestris),
partial (13%)
Length = 803
Score = 262 bits (132), Expect = 9e-69
Identities = 229/260 (88%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 2037 agatggtaaaaaagtaaggcttccaggacagaggttgcagagcaacagaacagtaaaatg 2096
|||||||| ||||||||||||||| |||||||||||| |||||||| |||||||| ||
Sbjct: 2 agatggtagaaaagtaaggcttcctggacagaggttggttagcaacaggacagtaaagtg 61
Query: 2097 cttaacaaatgtggagggattttcactccgtgctgcagatcttgaagaagtaacaattct 2156
||| ||||||||||||| |||||||||| ||| || || ||||||||||| || || ||
Sbjct: 62 cttgacaaatgtggaggcattttcactctctgccgccgaccttgaagaagtcacgatact 121
Query: 2157 tttcacaaga-ttcttgcggagccctcaagtccaaggagctttaaggtatgattcacctt 2215
|||||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 122 tttcacaagacttcttgcggagccctcaggtccaaggagctttaaggtatgaatcgcctt 181
Query: 2216 actggagatcccttgcagcaaacagaattcaggttgcatggagatacaggaagaaacgtc 2275
|||||||||||||||| |||||| | ||||| |||||||||||||| || |||||||||
Sbjct: 182 actggagatcccttgccgcaaaccgcattcaagttgcatggagatatagacagaaacgtc 241
Query: 2276 taagtcgtgctaatacctca 2295
| ||||||| |||| |||||
Sbjct: 242 tgagtcgtgttaattcctca 261
>gnl|LJGI|BP080087 homologue to UniRef100_A7QJZ5 Cluster: Chromosome undetermined
scaffold_109, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_109, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(5%)
Length = 382
Score = 83.8 bits (42), Expect = 4e-15
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1660 aggagagtacgagaggctgaacgatatagttgggctgcaacaaggggggttcatgaggaa 1719
||||||||| || |||||||||| |||| ||||||||||||||||||||| |||| |||
Sbjct: 331 aggagagtaagacaggctgaacggtataattgggctgcaacaaggggggtgaatgaagaa 272
Query: 1720 atgcttctagagaatttgccggaagatctccaga 1753
||| || | |||||| |||| |||||||| ||||
Sbjct: 271 atggttatggagaatctgccagaagatctgcaga 238