Miyakogusa Predicted Gene
- Lj2g3v0632130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0632130.1 Non Chatacterized Hit- tr|F6HX09|F6HX09_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,78.55,0,no
description,Glycoside hydrolase, catalytic domain;
(Trans)glycosidases,Glycoside hydrolase, super,CUFF.34930.1
(1146 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP035643 similar to UniRef100_A7NXM5 Cluster: Chromosom... 1092 0.0
gnl|LJGI|AV776277 similar to UniRef100_A7NXM5 Cluster: Chromosom... 624 e-178
gnl|LJGI|GO012697 similar to UniRef100_A7NXM5 Cluster: Chromosom... 281 5e-75
gnl|LJGI|GO027704 similar to UniRef100_A7NXM5 Cluster: Chromosom... 254 1e-66
>gnl|LJGI|BP035643 similar to UniRef100_A7NXM5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 551
Score = 1092 bits (551), Expect = 0.0
Identities = 551/551 (100%)
Strand = Plus / Plus
Query: 344 cgatggggaatacggtgaatcggaggaaggcggtgaacgcggcgatggcggcgttgagga 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgatggggaatacggtgaatcggaggaaggcggtgaacgcggcgatggcggcgttgagga 60
Query: 404 gtgctggtgtggaagggattatgatggatgtgtggtggggattggtggagagagaggcgc 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgctggtgtggaagggattatgatggatgtgtggtggggattggtggagagagaggcgc 120
Query: 464 ctggggagtataactggggcggttatgcggagcttctggaaatggcgaagaagcatgggt 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggggagtataactggggcggttatgcggagcttctggaaatggcgaagaagcatgggt 180
Query: 524 tgaaggtgcaggcggttatgtcgtttcatcaatgtgggggtaacgtcggtgattcttgca 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaaggtgcaggcggttatgtcgtttcatcaatgtgggggtaacgtcggtgattcttgca 240
Query: 584 ctattcccttgccgaaatgggctgtggaggagattgagaaagatcctgatcttgcatata 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctattcccttgccgaaatgggctgtggaggagattgagaaagatcctgatcttgcatata 300
Query: 644 ctgatcaatggggaagaagaaactatgaatatatatctcttgggtgtgatactttaccag 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgatcaatggggaagaagaaactatgaatatatatctcttgggtgtgatactttaccag 360
Query: 704 tactcaagggccgtacaccagttcagtgttatgctgatttcatgagagctttcagagaca 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tactcaagggccgtacaccagttcagtgttatgctgatttcatgagagctttcagagaca 420
Query: 764 atttcaagcaccttcttggtgacactgttgtggaaatccaagttgggatgggaccagctg 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atttcaagcaccttcttggtgacactgttgtggaaatccaagttgggatgggaccagctg 480
Query: 824 gtgagctgcgttacccctcatacccagagcaaaatgggacatggagattcccaggaattg 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgagctgcgttacccctcatacccagagcaaaatgggacatggagattcccaggaattg 540
Query: 884 gtgctttccaa 894
|||||||||||
Sbjct: 541 gtgctttccaa 551
>gnl|LJGI|AV776277 similar to UniRef100_A7NXM5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 480
Score = 624 bits (315), Expect = e-178
Identities = 327/331 (98%)
Strand = Plus / Plus
Query: 1 atggcgttgagcatgactcaccagatcggaagcctcgccgggacgccggtgacgtctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atggcgttgagcatgactcaccagatcggaagcctcgccgggacgccggtgacgtctgaa 209
Query: 61 tctggctccggagagacaacagcgtcggtgagcgcggcggcggtttggaaatctccggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tctggctccggagagacaacagcgtcggtgagcgcggcggcggtttggaaatctccggcg 269
Query: 121 atgaatctccggtgccaggtgactaggtcagagggcgcgactgcggatggattgtcaccg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 270 atgaatctccggtgccaggtgactaggtcagagggcgcgactgcggatggatagtcaccg 329
Query: 181 ccgatgagtccgtgcaggtcgccggcgctgcgggcggatctatccgcggcgtgccaggcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ccgatgagtccgtgcaggtcgccggcgctgcgggcggatctatccgcggcgtgccaggcg 389
Query: 241 tttgagacggcggtggtggagaaggagcatggaacgggagcgaagggggaagggaaaggg 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcggagacggcggtggtggagaaggagcatggaacgggagcgaagggggaagggaaaggg 449
Query: 301 actggagttccggtttatgtgatgatgccgt 331
|||||||||||||| ||||||||||||||||
Sbjct: 450 actggagttccggtgtatgtgatgatgccgt 480
>gnl|LJGI|GO012697 similar to UniRef100_A7NXM5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 625
Score = 281 bits (142), Expect = 5e-75
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 481 ggcggttatgcggagcttctggaaatggcgaagaagcatgggttgaaggtgcaggcggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 ggcggttatgcggagcttctggaaatggcgaagaagcatgggttgaaggtgcaggcggtt 113
Query: 541 atgtcgtttcatcaatgtgggggtaacgtcggtgattcttgcactattcccttgccgaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atgtcgtttcatcaatgtgggggtaacgtcggtgattcttgcactattcccttgccgaaa 173
Query: 601 tgggctgtggaggagattgaga 622
||||||||||||||||||||||
Sbjct: 174 tgggctgtggaggagattgaga 195
>gnl|LJGI|GO027704 similar to UniRef100_A7NXM5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (39%)
Length = 892
Score = 254 bits (128), Expect = 1e-66
Identities = 149/152 (98%), Gaps = 3/152 (1%)
Strand = Plus / Minus
Query: 995 acaactggccagaagacactgcatttttccgcagagaaggtggaggctgggatagtcatt 1054
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 878 acaactggccagaagacactgcatttt-ccgcagagaaggtggaggctgggatagtcatt 820
Query: 1055 atggtgaattttttctcacctggtattctcagatgctgttagatcatggtgaaagaattc 1114
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 atggtgaattttt-ctcac-tggtattctcagatgctgttagatcatggtgaaagaattc 762
Query: 1115 tcacatcagccaaatcaatctttgacagcact 1146
||||||||||||||||||||||||||||||||
Sbjct: 761 tcacatcagccaaatcaatctttgacagcact 730