Miyakogusa Predicted Gene
- Lj2g3v0621780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0621780.1 CUFF.34898.1
(330 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59529 similar to UniRef100_P26291 Cluster: Cytochrome... 143 8e-34
gnl|LJGI|TC70178 similar to UniRef100_P37384 Cluster: Meiotic re... 129 1e-29
gnl|LJGI|TC63857 similar to UniRef100_A2Q1D5 Cluster: Esterase/l... 92 3e-18
gnl|LJGI|TC66130 similar to UniRef100_A2Q1D5 Cluster: Esterase/l... 90 1e-17
gnl|LJGI|AV408706 similar to UniRef100_P26291 Cluster: Cytochrom... 62 2e-09
gnl|LJGI|TC60371 56 1e-07
gnl|LJGI|TC82154 weakly similar to UniRef100_A7QD70 Cluster: Chr... 50 9e-06
gnl|LJGI|TC70702 weakly similar to UniRef100_A7QD70 Cluster: Chr... 50 9e-06
>gnl|LJGI|TC59529 similar to UniRef100_P26291 Cluster: Cytochrome b6-f complex
iron-sulfur subunit, chloroplast precursor; n=1; Pisum
sativum|Rep: Cytochrome b6-f complex iron-sulfur
subunit, chloroplast precursor - Pisum sativum (Garden
pea), partial (97%)
Length = 940
Score = 143 bits (72), Expect = 8e-34
Identities = 107/119 (89%), Gaps = 6/119 (5%)
Strand = Plus / Plus
Query: 176 ggtcaggttctgcaactggtggtactattgccaaggatgccattggaaattatgtatttg 235
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||
Sbjct: 364 ggtcaggttctgcaactggtggtactattgcaaaggatgccattggaaatgatgtagttg 423
Query: 236 caga------gctcaagacacatgggcccggtgaccgtacgcttacacaaggattgaag 288
|||| ||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 424 cagagcaatggctcaaggcacatggacctggtgaccgtacgcttacacaaggattgaag 482
>gnl|LJGI|TC70178 similar to UniRef100_P37384 Cluster: Meiotic recombination protein
DMC1 homolog; n=1; Lilium longiflorum|Rep: Meiotic
recombination protein DMC1 homolog - Lilium longiflorum
(Trumpet lily), partial (23%)
Length = 1336
Score = 129 bits (65), Expect = 1e-29
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 atggttctgcagacccagttatccctgtcaaagatgcacatgagtttgccaagattatac 60
|||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 495 atggttctgcagacccagttatccctgtcaaagatgcacaatagtttcccaatattatac 554
Query: 61 ctaaccacaaattacatatca 81
|||||||||||||||||||||
Sbjct: 555 ctaaccacaaattacatatca 575
>gnl|LJGI|TC63857 similar to UniRef100_A2Q1D5 Cluster: Esterase/lipase/thioesterase;
n=1; Medicago truncatula|Rep:
Esterase/lipase/thioesterase - Medicago truncatula
(Barrel medic), partial (84%)
Length = 1096
Score = 91.7 bits (46), Expect = 3e-18
Identities = 100/114 (87%), Gaps = 3/114 (2%)
Strand = Plus / Plus
Query: 1 atggttctgcagacccagttatccctgtcaaagatgcacatga-gt-ttgccaaga-tta 57
|||||||| ||||| ||||||||||||| ||||||||| ||| || ||||||||| ||
Sbjct: 755 atggttcttcagacacagttatccctgttgaagatgcacttgacgtgttgccaagacttg 814
Query: 58 tacctaaccacaaattacatatcaaagaaggagctgatcatggttacactaatc 111
|||||||||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 815 tacctaaccacaaattacatgtcatagaaggagctgatcattcatacactaatc 868
>gnl|LJGI|TC66130 similar to UniRef100_A2Q1D5 Cluster: Esterase/lipase/thioesterase;
n=1; Medicago truncatula|Rep:
Esterase/lipase/thioesterase - Medicago truncatula
(Barrel medic), partial (88%)
Length = 1011
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 19 ttatccctgtcaaagatgcacatgagtttgccaagattatacctaaccacaaattacata 78
|||||||||| ||||||||||||||||||||||||| ||||| ||||||| || ||||
Sbjct: 646 ttatccctgttcaagatgcacatgagtttgccaagatcataccaaaccacaggttgcata 705
Query: 79 tcaaagaaggagctgatcatg 99
||| ||||||||||||||||
Sbjct: 706 tcattgaaggagctgatcatg 726
>gnl|LJGI|AV408706 similar to UniRef100_P26291 Cluster: Cytochrome b6-f complex
iron-sulfur subunit, chloroplast precursor; n=1; Pisum
sativum|Rep: Cytochrome b6-f complex iron-sulfur
subunit, chloroplast precursor - Pisum sativum (Garden
pea), partial (44%)
Length = 429
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 176 ggtcaggttctgcaactggtggtactattgc 206
|||||||||||||||||||||||||||||||
Sbjct: 398 ggtcaggttctgcaactggtggtactattgc 428
>gnl|LJGI|TC60371
Length = 814
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 129 cagtgatttcaagggcttgatccagtctgaatcaacaatcgccatgtg 176
||||||||| ||| |||||||| |||||||||||||| |||||||||
Sbjct: 203 cagtgatttgaagtgcttgatctggtctgaatcaacaaccgccatgtg 250
>gnl|LJGI|TC82154 weakly similar to UniRef100_A7QD70 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 897
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 297 agtttggtttaaattgcaaatccatagctgaat 329
|||||||||||||||| |||||| |||||||||
Sbjct: 684 agtttggtttaaattgaaaatccctagctgaat 716
>gnl|LJGI|TC70702 weakly similar to UniRef100_A7QD70 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 966
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 297 agtttggtttaaattgcaaatccatagctgaat 329
|||||||||||||||| |||||| |||||||||
Sbjct: 472 agtttggtttaaattgaaaatccctagctgaat 504