Miyakogusa Predicted Gene
- Lj2g3v0609810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0609810.1 Non Chatacterized Hit- tr|A5BC54|A5BC54_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.73,0.00002,RING/U-box,NULL; ZF_RING_2,Zinc finger, RING-type;
no description,Zinc finger, RING/FYVE/PHD-type; S,CUFF.34826.1
(1054 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70421 similar to UniRef100_A7QEK6 Cluster: Chromosome... 833 0.0
gnl|LJGI|TC70714 632 e-180
gnl|LJGI|TC75582 similar to UniRef100_Q9SXW6 Cluster: Ring finge... 58 1e-07
>gnl|LJGI|TC70421 similar to UniRef100_A7QEK6 Cluster: Chromosome chr17 scaffold_85,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_85, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 748
Score = 833 bits (420), Expect = 0.0
Identities = 420/420 (100%)
Strand = Plus / Plus
Query: 261 tactcaaccgttcgatgatctctccgccttattcggcacccgctcttccccgcctttcgg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tactcaaccgttcgatgatctctccgccttattcggcacccgctcttccccgcctttcgg 388
Query: 321 cgctgacaccaacgacgcgttcaacccctttgcgttcctccagaactacgtccaaaccct 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cgctgacaccaacgacgcgttcaacccctttgcgttcctccagaactacgtccaaaccct 448
Query: 381 ggctgccggaggcgccaacgtccagttcgtgatcgagaactccggcgaccctaccggagc 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggctgccggaggcgccaacgtccagttcgtgatcgagaactccggcgaccctaccggagc 508
Query: 441 gttccggatccctagcaacgtgaaccatggcgattacttcttcggtccgggcctcgagga 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gttccggatccctagcaacgtgaaccatggcgattacttcttcggtccgggcctcgagga 568
Query: 501 gctcatccagcaacttgcggagaatgatccaaatcgccgtgggacgccgcctgcgtcgaa 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gctcatccagcaacttgcggagaatgatccaaatcgccgtgggacgccgcctgcgtcgaa 628
Query: 561 gtctgccgtggaggggctcccggatgtttcggtgacggaggagcttctggcgtcagattc 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtctgccgtggaggggctcccggatgtttcggtgacggaggagcttctggcgtcagattc 688
Query: 621 ggcgcagtgtgctgtgtgcaaggatatcttcggcctcggcgacaccgcgaagcagatgcc 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ggcgcagtgtgctgtgtgcaaggatatcttcggcctcggcgacaccgcgaagcagatgcc 748
Score = 412 bits (208), Expect = e-114
Identities = 208/208 (100%)
Strand = Plus / Plus
Query: 1 atgtcttctgccggcgccggtgaccgcgccgttacctccggcgagcctcgccgttatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atgtcttctgccggcgccggtgaccgcgccgttacctccggcgagcctcgccgttatttc 128
Query: 61 tgccaccagtgcgaccgcaccgtccctatttccccttcctccggcgacctcatctgtccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tgccaccagtgcgaccgcaccgtccctatttccccttcctccggcgacctcatctgtccc 188
Query: 121 aattgcaacggtggcttcctcgaggaactcgaaacaccaatccccaaccctaaccctaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aattgcaacggtggcttcctcgaggaactcgaaacaccaatccccaaccctaaccctaac 248
Query: 181 cctatccatcccttcttctccttcacca 208
||||||||||||||||||||||||||||
Sbjct: 249 cctatccatcccttcttctccttcacca 276
>gnl|LJGI|TC70714
Length = 722
Score = 632 bits (319), Expect = e-180
Identities = 322/323 (99%)
Strand = Plus / Plus
Query: 732 caactcttgcccggtttgccggcacgagttgcccactgatgatcctgactacgagcagag 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caactcttgcccggtttgccggcacgagttgcccactgatgatcctgactacgagcagag 60
Query: 792 ggcaggccgccgtgtgtcgacggagacttctggcggtggtggtggccgcagcagcggtga 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcaggccgccgtgtgtcgacggagacttctggcggtggtggtggccgcagcagcggtga 120
Query: 852 tagttcacagaggagggggtttagggtctctttgccgtggccttttaggcaatctggttc 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagttcacagaggagggggtttagggtctctttgccgtggccttttaggcaatctggttc 180
Query: 912 ttcggctgcggagacaagcaatgttgggaatgctaacaacaacagcaataacaatagtgg 971
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 ttcggctgcggagacaagcaatgttgggaatgctaacaacaacagcaataaccatagtgg 240
Query: 972 aaataatagtgggcaatcgaatactgaaaatagggggaatcagaattttgagtcggagac 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaataatagtgggcaatcgaatactgaaaatagggggaatcagaattttgagtcggagac 300
Query: 1032 cagacaagaagatctcgactgag 1054
|||||||||||||||||||||||
Sbjct: 301 cagacaagaagatctcgactgag 323
>gnl|LJGI|TC75582 similar to UniRef100_Q9SXW6 Cluster: Ring finger protein; n=1;
Cicer arietinum|Rep: Ring finger protein - Cicer
arietinum (Chickpea) (Garbanzo), partial (79%)
Length = 777
Score = 58.0 bits (29), Expect = 1e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 739 tgcccggtttgccggcacgagttgcccactgatgatcctgactacgagcagag 791
||||||||||| ||| |||||||||||| ||||||||||| || ||||||||
Sbjct: 429 tgcccggtttgtcggttcgagttgcccacggatgatcctgattatgagcagag 481