Miyakogusa Predicted Gene
- Lj2g3v0609720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0609720.1 tr|F2DBE0|F2DBE0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,88.75,0,CoA_binding,CoA-binding; Ligase_CoA,ATP-citrate
lyase/succinyl-CoA ligase; Succinyl-CoA synthetase d,CUFF.34829.1
(951 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71866 homologue to UniRef100_A7QEL5 Cluster: Chromoso... 1885 0.0
gnl|LJGI|BW620298 homologue to UniRef100_A7QEL5 Cluster: Chromos... 751 0.0
gnl|LJGI|TC69308 homologue to UniRef100_A7Q7K8 Cluster: Chromoso... 587 e-167
gnl|LJGI|BW599405 weakly similar to UniRef100_A7Q7K8 Cluster: Ch... 157 2e-37
gnl|LJGI|BP079946 similar to UniRef100_A7Q7K8 Cluster: Chromosom... 88 1e-16
>gnl|LJGI|TC71866 homologue to UniRef100_A7QEL5 Cluster: Chromosome chr17 scaffold_85,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_85, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 1331
Score = 1885 bits (951), Expect = 0.0
Identities = 951/951 (100%)
Strand = Plus / Plus
Query: 1 atggggttgcaaccgctgaacaagttgatggcctccatcgccgcgcgccgccactgcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atggggttgcaaccgctgaacaagttgatggcctccatcgccgcgcgccgccactgcatc 157
Query: 61 cgccacctatcagcaacagcctcatcgccggcggtgttcgtcgacaagagcacgcgcgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 cgccacctatcagcaacagcctcatcgccggcggtgttcgtcgacaagagcacgcgcgtg 217
Query: 121 atctgccaggggatcacagggaagaacggcaccttccacacggaacaagccatcgaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atctgccaggggatcacagggaagaacggcaccttccacacggaacaagccatcgaatac 277
Query: 181 ggaaccaacatggtcggtggtgtcaccccgaagaaaggtggaaccgaacatctaggcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggaaccaacatggtcggtggtgtcaccccgaagaaaggtggaaccgaacatctaggcctt 337
Query: 241 cccgttttcaacaccgtcgctgaagccaaggctgagaccaaggccaacgcctccgtcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cccgttttcaacaccgtcgctgaagccaaggctgagaccaaggccaacgcctccgtcatc 397
Query: 301 tatgttcctccgcctttcgccgccaaagccatcatggaggccttggaggctgagttggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tatgttcctccgcctttcgccgccaaagccatcatggaggccttggaggctgagttggat 457
Query: 361 ctcgttgtttgcatcactgaaggcatccctcaacatgatatggtgcgagttaaagcagcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ctcgttgtttgcatcactgaaggcatccctcaacatgatatggtgcgagttaaagcagcg 517
Query: 421 attaacagacagtcgaaaactcgtctgataggaccaaactgccctggtatcatcaagcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 attaacagacagtcgaaaactcgtctgataggaccaaactgccctggtatcatcaagcct 577
Query: 481 ggggaatgtaaaatcggaatcatgccgggttacattcataagcctgggcgcattggaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ggggaatgtaaaatcggaatcatgccgggttacattcataagcctgggcgcattggaatt 637
Query: 541 gtttctcgttctggtactttgacgtatgaggcggttttccaaacgtctgctgttggcctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gtttctcgttctggtactttgacgtatgaggcggttttccaaacgtctgctgttggcctt 697
Query: 601 ggacaatccacttgtgtgggtatcggaggagatccctttaatggaacaaattttgttgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ggacaatccacttgtgtgggtatcggaggagatccctttaatggaacaaattttgttgat 757
Query: 661 tgccttaagaaattcctatcagatcctcagacagaaggtatcgttcttataggagagata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tgccttaagaaattcctatcagatcctcagacagaaggtatcgttcttataggagagata 817
Query: 721 ggtggaactgcagaggaggatgctgctgcactaattaaggaaagcgggactgagaagcct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ggtggaactgcagaggaggatgctgctgcactaattaaggaaagcgggactgagaagcct 877
Query: 781 attgttgcatttattgctggattaactgctccccctggccgccgtatgggtcatgctgga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 attgttgcatttattgctggattaactgctccccctggccgccgtatgggtcatgctgga 937
Query: 841 gctattgtgtcgggtggcaagggtactgcacaagacaaaattaaaaccctcaaggaagct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 gctattgtgtcgggtggcaagggtactgcacaagacaaaattaaaaccctcaaggaagct 997
Query: 901 ggggtcacagttgtggagtcccctgctaaaattggaactgccatgctagaa 951
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 ggggtcacagttgtggagtcccctgctaaaattggaactgccatgctagaa 1048
>gnl|LJGI|BW620298 homologue to UniRef100_A7QEL5 Cluster: Chromosome chr17
scaffold_85, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_85, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 462
Score = 751 bits (379), Expect = 0.0
Identities = 379/379 (100%)
Strand = Plus / Plus
Query: 1 atggggttgcaaccgctgaacaagttgatggcctccatcgccgcgcgccgccactgcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atggggttgcaaccgctgaacaagttgatggcctccatcgccgcgcgccgccactgcatc 143
Query: 61 cgccacctatcagcaacagcctcatcgccggcggtgttcgtcgacaagagcacgcgcgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cgccacctatcagcaacagcctcatcgccggcggtgttcgtcgacaagagcacgcgcgtg 203
Query: 121 atctgccaggggatcacagggaagaacggcaccttccacacggaacaagccatcgaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atctgccaggggatcacagggaagaacggcaccttccacacggaacaagccatcgaatac 263
Query: 181 ggaaccaacatggtcggtggtgtcaccccgaagaaaggtggaaccgaacatctaggcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggaaccaacatggtcggtggtgtcaccccgaagaaaggtggaaccgaacatctaggcctt 323
Query: 241 cccgttttcaacaccgtcgctgaagccaaggctgagaccaaggccaacgcctccgtcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cccgttttcaacaccgtcgctgaagccaaggctgagaccaaggccaacgcctccgtcatc 383
Query: 301 tatgttcctccgcctttcgccgccaaagccatcatggaggccttggaggctgagttggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatgttcctccgcctttcgccgccaaagccatcatggaggccttggaggctgagttggat 443
Query: 361 ctcgttgtttgcatcactg 379
|||||||||||||||||||
Sbjct: 444 ctcgttgtttgcatcactg 462
>gnl|LJGI|TC69308 homologue to UniRef100_A7Q7K8 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 731
Score = 587 bits (296), Expect = e-167
Identities = 296/296 (100%)
Strand = Plus / Plus
Query: 656 ttgattgccttaagaaattcctatcagatcctcagacagaaggtatcgttcttataggag 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgattgccttaagaaattcctatcagatcctcagacagaaggtatcgttcttataggag 60
Query: 716 agataggtggaactgcagaggaggatgctgctgcactaattaaggaaagcgggactgaga 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agataggtggaactgcagaggaggatgctgctgcactaattaaggaaagcgggactgaga 120
Query: 776 agcctattgttgcatttattgctggattaactgctccccctggccgccgtatgggtcatg 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcctattgttgcatttattgctggattaactgctccccctggccgccgtatgggtcatg 180
Query: 836 ctggagctattgtgtcgggtggcaagggtactgcacaagacaaaattaaaaccctcaagg 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctggagctattgtgtcgggtggcaagggtactgcacaagacaaaattaaaaccctcaagg 240
Query: 896 aagctggggtcacagttgtggagtcccctgctaaaattggaactgccatgctagaa 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagctggggtcacagttgtggagtcccctgctaaaattggaactgccatgctagaa 296
>gnl|LJGI|BW599405 weakly similar to UniRef100_A7Q7K8 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 481
Score = 157 bits (79), Expect = 2e-37
Identities = 157/183 (85%)
Strand = Plus / Plus
Query: 651 ttttgttgattgccttaagaaattcctatcagatcctcagacagaaggtatcgttcttat 710
|||||||||||||||||||||||| | | | |||||| ||| | ||||||| |||||
Sbjct: 298 ttttgttgattgccttaagaaattaccagcttatcctctgacgaactgtatcgtccttat 357
Query: 711 aggagagataggtggaactgcagaggaggatgctgctgcactaattaaggaaagcgggac 770
| |||||| |||||| |||| | ||||||||||| || || |||||||||||||||||
Sbjct: 358 tgaagagatcggtggacctgcgtatgaggatgctgcggctctcattaaggaaagcgggac 417
Query: 771 tgagaagcctattgttgcatttattgctggattaactgctccccctggccgccgtatggg 830
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 418 tgagaagcctattgttgcatttggggggggattaactgctccccctggccgccgtatggg 477
Query: 831 tca 833
|||
Sbjct: 478 tca 480
>gnl|LJGI|BP079946 similar to UniRef100_A7Q7K8 Cluster: Chromosome undetermined
scaffold_60, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_60, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 471
Score = 87.7 bits (44), Expect = 1e-16
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 904 gtcacagttgtggagtcccctgctaaaattggaactgccatgctagaa 951
||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gtcaccgttgtggagtcccctgctaaaattggaactgccatgctagaa 424