Miyakogusa Predicted Gene
- Lj2g3v0609610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0609610.1 Non Chatacterized Hit- tr|A5BUG6|A5BUG6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.78,1.99993e-41,rve,Integrase, catalytic core;
gag_pre-integrs,GAG-pre-integrase domain; PREDICTED PROTEIN
(FRAGMENT,CUFF.34926.1
(675 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82428 658 0.0
gnl|LJGI|BP030995 587 e-167
gnl|LJGI|GO016368 422 e-117
>gnl|LJGI|TC82428
Length = 376
Score = 658 bits (332), Expect = 0.0
Identities = 332/332 (100%)
Strand = Plus / Plus
Query: 1 atgaaatggttcaatttggtaatggtgcaggaaaccgaggagactcttctccaaggaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atgaaatggttcaatttggtaatggtgcaggaaaccgaggagactcttctccaaggaaca 104
Query: 61 cttaggaatggtctatgtgcttttgacaaccttcttcacaaagtgaacttgcattctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 cttaggaatggtctatgtgcttttgacaaccttcttcacaaagtgaacttgcattctgct 164
Query: 121 tccacactttcaaattctgcattgttatcttcttccagtcctgcatctgctttgtctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tccacactttcaaattctgcattgttatcttcttccagtcctgcatctgctttgtctgtt 224
Query: 181 tctgttttttcttcaaataaatgtgctcaggctgacatagattctagactctggcattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tctgttttttcttcaaataaatgtgctcaggctgacatagattctagactctggcattct 284
Query: 241 cggttaggacatgcttcacagaagattgtaagccatgtactcaagcaatgtaatccttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cggttaggacatgcttcacagaagattgtaagccatgtactcaagcaatgtaatccttct 344
Query: 301 ttgtcattgaataaaatcagtgttgtttgtga 332
||||||||||||||||||||||||||||||||
Sbjct: 345 ttgtcattgaataaaatcagtgttgtttgtga 376
>gnl|LJGI|BP030995
Length = 458
Score = 587 bits (296), Expect = e-167
Identities = 303/304 (99%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 28 caggaaaccgaggagactcttctccaaggaacacttaggaatggtctatgtgcttttgac 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caggaaaccgaggagactcttctccaaggaacacttaggaatggtctatgtgcttttgac 244
Query: 88 aaccttcttcacaaagtgaacttgcattctgcttccacactttcaaattctgcattgtta 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaccttcttcacaaagtgaacttgcattctgcttccacactttcaaattctgcattgtta 184
Query: 148 tcttcttccagtcctgcatctgctttgtctgtttctgttttttcttcaaataaatgtgct 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcttcttccagtcctgcatctgctttgtctgtttctgttttttcttcaaataaatgtgct 124
Query: 208 caggctgacatagattctagactctggcattctcggttaggacatgcttcacagaagatt 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 caggctgacatagattctagactctggcattctcggttaggacatgcttcacagaagatt 64
Query: 268 gtaagccatgtactcaagcaatgtaatccttctttgtcattgaataaaatcagtgttgtt 327
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gtaagccatgtactcaagc-atgtaatccttctttgtcattgaataaaatcagtgttgtt 5
Query: 328 tgtg 331
||||
Sbjct: 4 tgtg 1
>gnl|LJGI|GO016368
Length = 951
Score = 422 bits (213), Expect = e-117
Identities = 273/293 (93%)
Strand = Plus / Minus
Query: 1 atgaaatggttcaatttggtaatggtgcaggaaaccgaggagactcttctccaaggaaca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atgaaatggttcaatttggcaatggtgcaggaaaccgaggagactcttctccaaggaaca 243
Query: 61 cttaggaatggtctatgtgcttttgacaaccttcttcacaaagtgaacttgcattctgct 120
|||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 242 cttaggaatggtctatatgcttttgacaaccttcttcacaaagtgaaattgcattctgca 183
Query: 121 tccacactttcaaattctgcattgttatcttcttccagtcctgcatctgctttgtctgtt 180
|| |||| |||| ||||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 182 tcaacaccttcagtttctgcattattttcttcttcatgtcctgcatctgctttgtctgtt 123
Query: 181 tctgttttttcttcaaataaatgtgctcaggctgacatagattctagactctggcattct 240
||||||||| |||||||||||||| |||||||||| |||||| || ||| |||||| ||
Sbjct: 122 tctgtttttccttcaaataaatgtactcaggctgatttagattttaaactgtggcatgct 63
Query: 241 cggttaggacatgcttcacagaagattgtaagccatgtactcaagcaatgtaa 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cggttaggacatgcttcacagaagattgtaagccatgtactcaagcaatgtaa 10