Miyakogusa Predicted Gene
- Lj2g3v0593010.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0593010.2 tr|B7FII7|B7FII7_MEDTR Riboflavin kinase
OS=Medicago truncatula GN=MTR_4g091060 PE=2 SV=1,86.4,0,seg,NULL;
Flavokinase,Riboflavin kinase domain, bacterial/eukaryotic;
HAD_2,NULL; no description,HAD,CUFF.34769.2
(1119 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57891 similar to UniRef100_Q109K4 Cluster: HAD-superf... 1088 0.0
gnl|LJGI|TC81204 similar to UniRef100_Q2HU01 Cluster: Riboflavin... 837 0.0
gnl|LJGI|TC68550 similar to UniRef100_Q2HU02 Cluster: Haloacid d... 823 0.0
gnl|LJGI|TC75216 similar to UniRef100_Q2HU02 Cluster: Haloacid d... 577 e-164
gnl|LJGI|FS332983 similar to UniRef100_Q2HU02 Cluster: Haloacid ... 402 e-111
gnl|LJGI|AV773466 similar to UniRef100_A7R8Z6 Cluster: Chromosom... 88 1e-16
>gnl|LJGI|TC57891 similar to UniRef100_Q109K4 Cluster: HAD-superfamily hydrolase,
subfamily IA, variant 3 containing protein, expressed;
n=1; Oryza sativa Japonica Group|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 3 containing protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(92%)
Length = 1417
Score = 1088 bits (549), Expect = 0.0
Identities = 903/1021 (88%)
Strand = Plus / Plus
Query: 97 gttatccttgatttagatggcacactgctcaacacagatggcgttgtaggcaatgttttg 156
|||||||||||||| |||||||| || || |||||||||||| |||| || || ||||||
Sbjct: 143 gttatccttgatttggatggcacgcttcttaacacagatggcattgtgggaaacgttttg 202
Query: 157 aagttctcattaggaaagtatggaaaggaatgggatggaagagaagttcttaaaattgtg 216
||| | | || ||||| |||||||||||||||||||| ||||||| ||| || |||
Sbjct: 203 aaggttttgttgggaaactatggaaaggaatgggatgggagagaagcgaataagatagtg 262
Query: 217 gggaagacaccatttgaagctgctgctgcagttgtagaagattatggacttccctgttcg 276
||||||||||| ||||||||| ||||||| ||| | ||||||||||||||| |||| ||
Sbjct: 263 gggaagacaccctttgaagcttctgctgctgttattgaagattatggacttacctgctcc 322
Query: 277 acgactgaatttatttctgagatttcgcctttgttctctgatcaatggtgcaacattaaa 336
|| ||||||| ||||| ||||||| || |||||| ||||||| |||||||| ||||||
Sbjct: 323 actgctgaattcttttctcagatttcacccttgttcgctgatcagtggtgcaatattaaa 382
Query: 337 gcacttcctggtgccaatcggttgattaaacatttgaagagtcatggagctccaatggct 396
|||||||||||||| ||| ||||||||||||||||||||||||||| || ||| |||||
Sbjct: 383 gcacttcctggtgctaataggttgattaaacatttgaagagtcatgcagttccgatggcc 442
Query: 397 ttggcatcaaactccccaagggaaaacattgaagccaaaatatcatttcatgatggatgg 456
||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 443 ttggcgtcaaattcttcaagggaaaacattgaagccaaaatatcctttcatgatggatgg 502
Query: 457 aaagattctttctctgtcataattggtggagatgaagtcagaaaagggaagccttcccct 516
|||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 503 aaagattctttcgctgtcataattggtggagatgaagtcagaactgggaaaccttcccct 562
Query: 517 gaaatattcgttgaagcggctaggaggttaagcattgaaccttcttgctgtcttgtcatt 576
|| |||||| ||||||| |||||||||||| |||| || ||||| |||||||||||||
Sbjct: 563 gacatattcattgaagctgctaggaggttaggcatagagccttcaaactgtcttgtcatt 622
Query: 577 gaagactctataccaggtgttactgcaggtaaggctgctggaatggaagtggttgctgta 636
||||| ||| |||| |||||||||||||||||| |||||| |||||||||| ||||||||
Sbjct: 623 gaagattctctacccggtgttactgcaggtaagactgctgaaatggaagtgattgctgta 682
Query: 637 ccatctcttccaaaacagtcacatctctatactgcagcagatgaggtgatcaattccctg 696
||||| ||||||| ||||| ||||| | ||| |||||||| | ||| |||||||| ||
Sbjct: 683 ccatcaattccaaagcagtcgcatctatttaccgcagcagacgtggtcatcaattcgttg 742
Query: 697 cttgatttgcaacttgaaaagtggggtctacctccatttgaagattgggttgagggaact 756
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cttgatttgcaactcgaaaactggggtctacctccatttgaagattgggttgagggaact 802
Query: 757 ttgcccatagatccttggcatattagtggtcctgtcatcaagggatttggtcgtggctca 816
||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 803 ttgcccacggatccttggtatattggtggtcctgtcatcaagggatttggacgtggctcg 862
Query: 817 aaggtcctcggaatccctacagctaatttatcagcaaaaggctattcagatctccttgtg 876
||||| ||||| |||| ||||||||||| ||| || | ||||| ||||| |||||||
Sbjct: 863 aaggtactcggggtcccaacagctaatttgtcaacagagggctactcagaactccttgca 922
Query: 877 gagcatcctgcaggagtttattttggttgggctggattacctgggagaggtatttttaaa 936
||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 923 gagcatcctacaggagtttattttggttgggctggattatcagggagaggtatttttaaa 982
Query: 937 atggttatgagcattggttggaatccatatttcaacaacaaagaaaaaactatagaacca 996
||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 983 atggtgatgagcattggttggaatccatatttcaagaacaaagaaaaggctatagaacca 1042
Query: 997 tggttactccatgatttcagtgaggatttctacggggaagaactgcggcttgttatagtt 1056
|||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 1043 tggttacttcatgatttcgatgaggatttctatggggaagaactgcggcttgttatagtt 1102
Query: 1057 ggttacatccgtcctgaggccaattttccttcccttgaaagcttgatagctaagattcat 1116
|||||||| || | ||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1103 ggttacatacgggccgaggccaattttcctacccttgaaagcctgatagctaagattcat 1162
Query: 1117 g 1117
|
Sbjct: 1163 g 1163
>gnl|LJGI|TC81204 similar to UniRef100_Q2HU01 Cluster: Riboflavin kinase / FAD
synthetase; n=1; Medicago truncatula|Rep: Riboflavin
kinase / FAD synthetase - Medicago truncatula (Barrel
medic), partial (69%)
Length = 683
Score = 837 bits (422), Expect = 0.0
Identities = 422/422 (100%)
Strand = Plus / Plus
Query: 698 ttgatttgcaacttgaaaagtggggtctacctccatttgaagattgggttgagggaactt 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgatttgcaacttgaaaagtggggtctacctccatttgaagattgggttgagggaactt 60
Query: 758 tgcccatagatccttggcatattagtggtcctgtcatcaagggatttggtcgtggctcaa 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcccatagatccttggcatattagtggtcctgtcatcaagggatttggtcgtggctcaa 120
Query: 818 aggtcctcggaatccctacagctaatttatcagcaaaaggctattcagatctccttgtgg 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggtcctcggaatccctacagctaatttatcagcaaaaggctattcagatctccttgtgg 180
Query: 878 agcatcctgcaggagtttattttggttgggctggattacctgggagaggtatttttaaaa 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcatcctgcaggagtttattttggttgggctggattacctgggagaggtatttttaaaa 240
Query: 938 tggttatgagcattggttggaatccatatttcaacaacaaagaaaaaactatagaaccat 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggttatgagcattggttggaatccatatttcaacaacaaagaaaaaactatagaaccat 300
Query: 998 ggttactccatgatttcagtgaggatttctacggggaagaactgcggcttgttatagttg 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggttactccatgatttcagtgaggatttctacggggaagaactgcggcttgttatagttg 360
Query: 1058 gttacatccgtcctgaggccaattttccttcccttgaaagcttgatagctaagattcatg 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttacatccgtcctgaggccaattttccttcccttgaaagcttgatagctaagattcatg 420
Query: 1118 ca 1119
||
Sbjct: 421 ca 422
>gnl|LJGI|TC68550 similar to UniRef100_Q2HU02 Cluster: Haloacid dehalogenase/epoxide
hydrolase; Haloacid dehalogenase-like hydrolase; n=1;
Medicago truncatula|Rep: Haloacid dehalogenase/epoxide
hydrolase; Haloacid dehalogenase-like hydrolase -
Medicago truncatula (Barrel medic), partial (78%)
Length = 763
Score = 823 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus
Query: 38 attttggtctgagtgacaatatgtcgattgcaaagccttttaggaagtggattagttgtg 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 attttggtctgagtgacaatatgtcgattgcaaagccttttaggaagtggattagttgtg 218
Query: 98 ttatccttgatttagatggcacactgctcaacacagatggcgttgtaggcaatgttttga 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ttatccttgatttagatggcacactgctcaacacagatggcgttgtaggcaatgttttga 278
Query: 158 agttctcattaggaaagtatggaaaggaatgggatggaagagaagttcttaaaattgtgg 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 agttctcattaggaaagtatggaaaggaatgggatggaagagaagttcttaaaattgtgg 338
Query: 218 ggaagacaccatttgaagctgctgctgcagttgtagaagattatggacttccctgttcga 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ggaagacaccatttgaagctgctgctgcagttgtagaagattatggacttccctgttcga 398
Query: 278 cgactgaatttatttctgagatttcgcctttgttctctgatcaatggtgcaacattaaag 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cgactgaatttatttctgagatttcgcctttgttctctgatcaatggtgcaacattaaag 458
Query: 338 cacttcctggtgccaatcggttgattaaacatttgaagagtcatggagctccaatggctt 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cacttcctggtgccaatcggttgattaaacatttgaagagtcatggagctccaatggctt 518
Query: 398 tggcatcaaactccccaagggaaaacattgaagccaaaatatcatttcatgatgg 452
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tggcatcaaactccccaagggaaaacattgaagccaaaatatcatttcatgatgg 573
Score = 87.7 bits (44), Expect = 1e-16
Identities = 51/52 (98%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 452 gatggaaagattctttctctgtcataattggtggagatgaagtcagaaaagg 503
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gatggaaagat-ctttctctgtcataattggtggagatgaagtcagaaaagg 718
>gnl|LJGI|TC75216 similar to UniRef100_Q2HU02 Cluster: Haloacid dehalogenase/epoxide
hydrolase; Haloacid dehalogenase-like hydrolase; n=1;
Medicago truncatula|Rep: Haloacid dehalogenase/epoxide
hydrolase; Haloacid dehalogenase-like hydrolase -
Medicago truncatula (Barrel medic), partial (46%)
Length = 715
Score = 577 bits (291), Expect = e-164
Identities = 304/307 (99%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 38 attttggtctgagtgacaatatgtcgattgcaaagccttttaggaagtggattagttgtg 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 attttggtctgagtgacaatatgtcgattgcaaagccttttaggaagtggattagttgtg 469
Query: 98 ttatccttgatttagatggcacactgctcaacacagatggcgttgtaggcaatgttttga 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttatccttgatttagatggcacactgctcaacacagatggcgttgtaggcaatgttttga 529
Query: 158 agttctcattaggaaagtatggaaaggaatgggatggaagagaagttcttaaaattgtgg 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 agttctcattaggaaagtatggaaaggaatgggatggaagagaagttcttaaaattgtgg 589
Query: 218 ggaagacaccatttgaagctgctgctgcagttgtagaagattatggacttccctgttcga 277
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggaagacagcatttgaagctgctgctgcagttgtagaagattatggacttccctgttcga 649
Query: 278 cgactgaatttatttctgagatttcgcctttgttctctgatcaatggtgcaacattaaag 337
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 650 cgaccgaatttatttctgagatttcgcctttgttctctgatcaatggtgc-acattaaag 708
Query: 338 cacttcc 344
|||||||
Sbjct: 709 cacttcc 715
Score = 73.8 bits (37), Expect = 2e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1 atgcttcacccttcacttcttgtgccgaaagctctct 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 250 atgcttcacccttcacttcttgtgccgaaagctctct 286
>gnl|LJGI|FS332983 similar to UniRef100_Q2HU02 Cluster: Haloacid dehalogenase/epoxide
hydrolase; Haloacid dehalogenase-like hydrolase; n=1;
Medicago truncatula|Rep: Haloacid dehalogenase/epoxide
hydrolase; Haloacid dehalogenase-like hydrolase -
Medicago truncatula (Barrel medic), partial (80%)
Length = 590
Score = 402 bits (203), Expect = e-111
Identities = 365/419 (87%)
Strand = Plus / Plus
Query: 97 gttatccttgatttagatggcacactgctcaacacagatggcgttgtaggcaatgttttg 156
|||||||||||||| |||||||| || || |||||||||||| |||| || || ||||||
Sbjct: 172 gttatccttgatttggatggcacgcttcttaacacagatggcattgtgggaaacgttttg 231
Query: 157 aagttctcattaggaaagtatggaaaggaatgggatggaagagaagttcttaaaattgtg 216
||| | | || ||||| |||||||||||||||||||| ||||||| ||| || |||
Sbjct: 232 aaggttttgttgggaaactatggaaaggaatgggatgggagagaagcgaataagatagtg 291
Query: 217 gggaagacaccatttgaagctgctgctgcagttgtagaagattatggacttccctgttcg 276
||||||||||| ||||||||| ||||||| ||| | ||||||||||||||| |||| ||
Sbjct: 292 gggaagacaccctttgaagcttctgctgctgttattgaagattatggacttacctgctcc 351
Query: 277 acgactgaatttatttctgagatttcgcctttgttctctgatcaatggtgcaacattaaa 336
|| ||||||| ||||| ||||||| || |||||| ||||||| |||||||| ||||||
Sbjct: 352 actgctgaattcttttctcagatttcacccttgttcgctgatcagtggtgcaatattaaa 411
Query: 337 gcacttcctggtgccaatcggttgattaaacatttgaagagtcatggagctccaatggct 396
|||||||||||||| ||| ||||||||||||||||||||||||||| || ||| |||||
Sbjct: 412 gcacttcctggtgctaataggttgattaaacatttgaagagtcatgcagttccgatggcc 471
Query: 397 ttggcatcaaactccccaagggaaaacattgaagccaaaatatcatttcatgatggatgg 456
||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 472 ttggcgtcaaattcttcaagggaaaacattgaagccaaaatatcctttcatgatggatgg 531
Query: 457 aaagattctttctctgtcataattggtggagatgaagtcagaaaagggaagccttcccc 515
|||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 532 aaagattctttcgctgtcataattggtggagatgaagtcagaactgggaaaccttcccc 590
>gnl|LJGI|AV773466 similar to UniRef100_A7R8Z6 Cluster: Chromosome undetermined
scaffold_3129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 455
Score = 87.7 bits (44), Expect = 1e-16
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 1042 cggcttgttatagttggttacatccgtcctgaggccaattttccttcccttgaaagcttg 1101
||||||||||||||||||||||| || | ||||||||||||||| |||||| ||| ||
Sbjct: 452 cggcttgttatagttggttacatacgggccgaggccaattttcctacccttgccagcctg 393
Query: 1102 atagctaagattcatg 1117
||||||||||||||||
Sbjct: 392 atagctaagattcatg 377