Miyakogusa Predicted Gene
- Lj2g3v0592880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0592880.1 Non Chatacterized Hit- tr|B7FJ52|B7FJ52_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,86.53,0,no
description,Nucleotide-binding, alpha-beta plait; RNA recognition
motif,RNA recognition motif dom,CUFF.34764.1
(726 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62598 similar to UniRef100_Q41498 Cluster: U1snRNP-sp... 1439 0.0
>gnl|LJGI|TC62598 similar to UniRef100_Q41498 Cluster: U1snRNP-specific protein, U1A;
n=1; Solanum tuberosum|Rep: U1snRNP-specific protein,
U1A - Solanum tuberosum (Potato), partial (92%)
Length = 1013
Score = 1439 bits (726), Expect = 0.0
Identities = 726/726 (100%)
Strand = Plus / Plus
Query: 1 atgacagaagcgaacgcgggtcctgaaacccctcagaacaacaccatctacatcaacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atgacagaagcgaacgcgggtcctgaaacccctcagaacaacaccatctacatcaacaac 161
Query: 61 cttaatgaaaagattaagattgaagagttgaagaaatctttgcacgctgttttcagtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cttaatgaaaagattaagattgaagagttgaagaaatctttgcacgctgttttcagtcag 221
Query: 121 ttcgggaagatacttgaggtgttcgctgccaagacgctcaagcacaagggtcaagcttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ttcgggaagatacttgaggtgttcgctgccaagacgctcaagcacaagggtcaagcttgg 281
Query: 181 gtggtctttgaagatctctcttctgcttccaatgcacttaggcaaatgcaaggtttcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gtggtctttgaagatctctcttctgcttccaatgcacttaggcaaatgcaaggtttcccc 341
Query: 241 ttctatgacaagcccatgagaatacagtatgcaaaggctaaatctgatatcatagcaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttctatgacaagcccatgagaatacagtatgcaaaggctaaatctgatatcatagcaaaa 401
Query: 301 gcggatggtacttttgttcctagggaaaaacgtaagaggcatgaggacaaaggcaacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gcggatggtacttttgttcctagggaaaaacgtaagaggcatgaggacaaaggcaacaaa 461
Query: 361 aaacggaaggaccaaaatgatgctaatttagctgggatgggtcttaatcctgcttatcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaacggaaggaccaaaatgatgctaatttagctgggatgggtcttaatcctgcttatcct 521
Query: 421 ggtgcttatggtgcaacacctataccttatccaggtggtttaaaatctatggtacctgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ggtgcttatggtgcaacacctataccttatccaggtggtttaaaatctatggtacctgag 581
Query: 481 gctcctgcgcctcccaataatattctcttcattcagaatcttcccaatgagacaactccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gctcctgcgcctcccaataatattctcttcattcagaatcttcccaatgagacaactccc 641
Query: 541 atgatgctgcaaatgctctttcttcaatatcctggattcaaggaagttagaatggttgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atgatgctgcaaatgctctttcttcaatatcctggattcaaggaagttagaatggttgaa 701
Query: 601 acaaagccaggtattgcctttgtggaatatggagatgagatgcaatccacagtggccatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 acaaagccaggtattgcctttgtggaatatggagatgagatgcaatccacagtggccatg 761
Query: 661 caggccctgcaaggtttcaagataaccccacaaaaccctatgttgataacttatgccaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 caggccctgcaaggtttcaagataaccccacaaaaccctatgttgataacttatgccaag 821
Query: 721 aaatag 726
||||||
Sbjct: 822 aaatag 827