Miyakogusa Predicted Gene
- Lj2g3v0592860.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0592860.4 tr|D7FVV9|D7FVV9_ECTSI B1142C05.17 OS=Ectocarpus
siliculosus GN=Esi_0003_0058 PE=4 SV=1,71.43,3e-19,UNCHARACTERIZED
METHYLTRANSFERASE C70.08C,NULL; METHYLTRANSFERASE,NULL,CUFF.34767.4
(303 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73129 homologue to UniRef100_A7PE95 Cluster: Chromoso... 601 e-171
gnl|LJGI|TC58131 similar to UniRef100_A7PE95 Cluster: Chromosome... 345 1e-94
gnl|LJGI|BW599062 homologue to UniRef100_A7PE95 Cluster: Chromos... 293 3e-79
gnl|LJGI|TC78554 similar to UniRef100_A7PE95 Cluster: Chromosome... 155 2e-37
gnl|LJGI|BP056646 similar to UniRef100_Q7ZFZ6 Cluster: Envelope ... 149 1e-35
gnl|LJGI|BP066978 homologue to UniRef100_A7PE95 Cluster: Chromos... 105 2e-22
>gnl|LJGI|TC73129 homologue to UniRef100_A7PE95 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 639
Score = 601 bits (303), Expect = e-171
Identities = 303/303 (100%)
Strand = Plus / Plus
Query: 1 atgtgttcagagctctgcaaccagaacccagatgcatcattagattgccaatgcagacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 atgtgttcagagctctgcaaccagaacccagatgcatcattagattgccaatgcagacac 198
Query: 61 gttcgtcctcatcccataatttggagtaacagaatgagcttttcaaaccggtgcttctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gttcgtcctcatcccataatttggagtaacagaatgagcttttcaaaccggtgcttctgg 258
Query: 121 acaaaagccatttctttatggacatcaactggggatgctgaccacgttatgattgtgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acaaaagccatttctttatggacatcaactggggatgctgaccacgttatgattgtgggt 318
Query: 181 tcatatttccattatgctggtggatttgaaccccctcaggctgtcgatatatctcctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcatatttccattatgctggtggatttgaaccccctcaggctgtcgatatatctcctaat 378
Query: 241 cgtggacgctctgatcctatgtacattgtgtactctaggaagctctaccgcttgagataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cgtggacgctctgatcctatgtacattgtgtactctaggaagctctaccgcttgagataa 438
Query: 301 ata 303
|||
Sbjct: 439 ata 441
>gnl|LJGI|TC58131 similar to UniRef100_A7PE95 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (70%)
Length = 1142
Score = 345 bits (174), Expect = 1e-94
Identities = 204/213 (95%), Gaps = 2/213 (0%)
Strand = Plus / Plus
Query: 93 aatgagcttttcaaaccggtgcttctggacaaaagccatttctttatggacatcaactgg 152
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 731 aatgagcttttcaaaccggtgcttctggacaaaagccatttctatatggacatcaactgg 790
Query: 153 ggatgctgaccacgttatgattgtgggttcatatttccattatgctggtggatttgaacc 212
||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 791 ggatgctgatcatgttatgattgttggttcatatttccattatgctggtggatttgaacc 850
Query: 213 ccctcaggctgtcgatatatctcctaatcgtggacgctctgatcctatgtacattgtgta 272
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 851 ccctcaggctgtcgatatatctcctaatcctggacgctctgatcccatgtacattgtgta 910
Query: 273 ctctaggaag--ctctaccgcttgagataaata 303
|||||||||| |||||| ||||||||||||||
Sbjct: 911 ctctaggaaggtctctactgcttgagataaata 943
>gnl|LJGI|BW599062 homologue to UniRef100_A7PE95 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 315
Score = 293 bits (148), Expect = 3e-79
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 156 tgctgaccacgttatgattgtgggttcatatttccattatgctggtggatttgaaccccc 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tgctgaccacgttatgattgtgggttcatatttccattatgctggtggatttgaaccccc 64
Query: 216 tcaggctgtcgatatatctcctaatcgtggacgctctgatcctatgtacattgtgtactc 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tcaggctgtcgatatatctcctaatcgtggacgctctgatcctatgtacattgtgtactc 124
Query: 276 taggaagctctaccgcttgagataaata 303
||||||||||||||||||||||||||||
Sbjct: 125 taggaagctctaccgcttgagataaata 152
>gnl|LJGI|TC78554 similar to UniRef100_A7PE95 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 513
Score = 155 bits (78), Expect = 2e-37
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 218 aggctgtcgatatatctcctaatcgtggacgctctgatcctatgtacattgtgtactcta 277
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 298 aggctgtcgatatatctcctaatcgtggacgctctgatcctatgtaccttgtgtacttta 357
Query: 278 ggaagctctaccgcttgagataaata 303
||||||||||||||||||||||||||
Sbjct: 358 ggaagctctaccgcttgagataaata 383
>gnl|LJGI|BP056646 similar to UniRef100_Q7ZFZ6 Cluster: Envelope glycoprotein; n=1;
Human immunodeficiency virus 1|Rep: Envelope
glycoprotein - Human immunodeficiency virus 1, partial
(11%)
Length = 511
Score = 149 bits (75), Expect = 1e-35
Identities = 88/91 (96%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 2 tgtgttcagagctctgcaaccagaacccagatgcatcattagattgccaatgcagacacg 61
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 334 tgtgttcagagctctgcaaccagaacccagatgcatcacaagattgccaatgcagacacg 275
Query: 62 ttcgtcctcatcccataatttggagtaacag 92
|||||||||||||||| ||||||||||||||
Sbjct: 274 ttcgtcctcatcccat-atttggagtaacag 245
>gnl|LJGI|BP066978 homologue to UniRef100_A7PE95 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 255
Score = 105 bits (53), Expect = 2e-22
Identities = 80/88 (90%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 218 aggctgtcgatatatctcctaatcgtggacgctctgatcctatgtacattgtgtactcta 277
|||||||| |||||||||| |||| ||||| |||||||| |||||||||||||||||||
Sbjct: 189 aggctgtcaatatatctcccaatcctggactgtctgatccgatgtacattgtgtactcta 130
Query: 278 ggaagc--tctaccgcttgagataaata 303
|||||| ||||||||||||||||||||
Sbjct: 129 ggaagctttctaccgcttgagataaata 102