Miyakogusa Predicted Gene
- Lj2g3v0571700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0571700.1 tr|G7IWD4|G7IWD4_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_3g023630 PE=4
SV=1,34.85,8e-19,FBOX,F-box domain, cyclin-like; no description,NULL;
F-box domain,F-box domain, cyclin-like; seg,NUL,CUFF.34755.1
(725 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598736 weakly similar to UniRef100_A7QK65 Cluster: Ch... 938 0.0
gnl|LJGI|FS331731 similar to UniRef100_A7QK65 Cluster: Chromosom... 143 2e-33
gnl|LJGI|FS342663 similar to UniRef100_A7QK60 Cluster: Chromosom... 105 4e-22
gnl|LJGI|FS341858 similar to UniRef100_A7QK60 Cluster: Chromosom... 101 6e-21
gnl|LJGI|FS340050 similar to UniRef100_A7QK60 Cluster: Chromosom... 98 9e-20
gnl|LJGI|TC62962 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik... 98 9e-20
gnl|LJGI|TC68218 similar to UniRef100_A7QK60 Cluster: Chromosome... 96 4e-19
gnl|LJGI|TC60968 weakly similar to UniRef100_A7QK65 Cluster: Chr... 82 5e-15
gnl|LJGI|TC63672 similar to UniRef100_A7QK60 Cluster: Chromosome... 78 9e-14
gnl|LJGI|DC599890 similar to UniRef100_A7QK60 Cluster: Chromosom... 74 1e-12
gnl|LJGI|TC71396 weakly similar to UniRef100_Q501E9 Cluster: F-b... 60 2e-08
gnl|LJGI|GO033933 similar to UniRef100_A7QK60 Cluster: Chromosom... 58 8e-08
gnl|LJGI|TC82434 similar to UniRef100_A7QK60 Cluster: Chromosome... 56 3e-07
gnl|LJGI|TC59854 similar to UniRef100_A7QK60 Cluster: Chromosome... 52 5e-06
>gnl|LJGI|DC598736 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 553
Score = 938 bits (473), Expect = 0.0
Identities = 473/473 (100%)
Strand = Plus / Plus
Query: 1 atggaagataggctcagcatcttaccggacccaatcctgtgccacattctctcttttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggaagataggctcagcatcttaccggacccaatcctgtgccacattctctcttttctc 140
Query: 61 ccaaccgaggtagcaattgccacaagcgttctctcgaagcggtggaagcctctatggcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ccaaccgaggtagcaattgccacaagcgttctctcgaagcggtggaagcctctatggcgt 200
Query: 121 tcagtccccactctcgacttcgactacatttacgaaagcaaagaggcgaattctcgcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagtccccactctcgacttcgactacatttacgaaagcaaagaggcgaattctcgcttt 260
Query: 181 attcaatctgtgtacgcattcatcttcaccagagatcaacgccaacctttccacaaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcaatctgtgtacgcattcatcttcaccagagatcaacgccaacctttccacaaattc 320
Query: 241 cgcatcagattatgggcggaaactgaggagtctgaggaacctaccaatgtcgctgtttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgcatcagattatgggcggaaactgaggagtctgaggaacctaccaatgtcgctgtttgg 380
Query: 301 cttaactttgccgcgcaacgccagcttcagcaccttgagatctgtctcttcaatcaccgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttaactttgccgcgcaacgccagcttcagcaccttgagatctgtctcttcaatcaccgg 440
Query: 361 gttcattcactaccaccacccaccataccccctgacatctttttcacttgcagcacaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttcattcactaccaccacccaccataccccctgacatctttttcacttgcagcacaaat 500
Query: 421 cttgtggttctcaagttgcatggtttaagcttgaaacctctttcctctgttga 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgtggttctcaagttgcatggtttaagcttgaaacctctttcctctgttga 553
>gnl|LJGI|FS331731 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 593
Score = 143 bits (72), Expect = 2e-33
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 16 agcatcttaccggacccaatcctgtgccacattctctcttttctcccaaccgaggtagca 75
|||| |||||| ||| ||||||| ||||| || |||||||||||||||||| || |||
Sbjct: 79 agcagcttaccagactcaatcctctgccatatactctcttttctcccaaccaagcaagct 138
Query: 76 attgccacaagcgttctctcgaagcggtggaagcctctatggcgttcagtccccactctc 135
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 139 gttgccacaagcgttctctcgaagcgatggatgcctctatggcgttcagtccccactctg 198
Query: 136 gacttcga 143
||||||||
Sbjct: 199 gacttcga 206
>gnl|LJGI|FS342663 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 675
Score = 105 bits (53), Expect = 4e-22
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 7 gataggctcagcatcttaccggacccaatcctgtgccacattctctcttttctcccaacc 66
|||||| |||||| |||||| ||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 161 gataggatcagcaccttaccagacccaatcctctgtcacatactctcctttctcccaacc 220
Query: 67 gaggtagcaattgccacaagcgttctctcgaagcggtggaagcctctatggcgttcagtc 126
|| | | |||||||||| |||||||| ||| |||||||||| || |||||||||||
Sbjct: 221 aagcaaaccgttgccacaagtgttctctccaagaggtggaagccactgtggcgttcagtt 280
Query: 127 cccactctcgacttcga 143
||| ||||||||||||
Sbjct: 281 cccgttctcgacttcga 297
>gnl|LJGI|FS341858 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 700
Score = 101 bits (51), Expect = 6e-21
Identities = 120/143 (83%)
Strand = Plus / Plus
Query: 1 atggaagataggctcagcatcttaccggacccaatcctgtgccacattctctcttttctc 60
|||||||||||||| |||||||| || || |||| || || | ||||||||||||||||
Sbjct: 88 atggaagataggcttagcatcttgccagattcaattctctgtcgcattctctcttttctc 147
Query: 61 ccaaccgaggtagcaattgccacaagcgttctctcgaagcggtggaagcctctatggcgt 120
|||||| || ||| |||| |||||| ||||||||||| |||||| || || ||||||
Sbjct: 148 ccaaccaagcaagctgttgcaacaagcattctctcgaagaagtggaaaccactgtggcgt 207
Query: 121 tcagtccccactctcgacttcga 143
|||||| |||||||| |||||||
Sbjct: 208 tcagtcaccactctccacttcga 230
>gnl|LJGI|FS340050 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 716
Score = 97.6 bits (49), Expect = 9e-20
Identities = 109/129 (84%)
Strand = Plus / Plus
Query: 16 agcatcttaccggacccaatcctgtgccacattctctcttttctcccaaccgaggtagca 75
|||| |||||| ||| ||||||| |||||||||||| ||||||||||||| || |||
Sbjct: 166 agcaacttaccagacgcaatcctctgccacattctcagttttctcccaaccaagcaagcg 225
Query: 76 attgccacaagcgttctctcgaagcggtggaagcctctatggcgttcagtccccactctc 135
||||||| | ||||||||| ||| |||||||||| |||||||||||| | || |||||
Sbjct: 226 gttgccaccaccgttctctccaagaggtggaagccactatggcgttcaaccaccgctctc 285
Query: 136 gacttcgac 144
|||||||||
Sbjct: 286 gacttcgac 294
>gnl|LJGI|TC62962 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (17%)
Length = 741
Score = 97.6 bits (49), Expect = 9e-20
Identities = 106/125 (84%)
Strand = Plus / Plus
Query: 16 agcatcttaccggacccaatcctgtgccacattctctcttttctcccaaccgaggtagca 75
|||| |||||||||| | |||||||||| ||| |||||||||||||||||| | |||
Sbjct: 165 agcagcttaccggacgcgatcctgtgccgcatactctcttttctcccaaccaaacaagcc 224
Query: 76 attgccacaagcgttctctcgaagcggtggaagcctctatggcgttcagtccccactctc 135
|||| || ||||||||||| |||||||||| || ||||||||||||||| | ||||||
Sbjct: 225 gttgcaaccagcgttctctccaagcggtggatcccactatggcgttcagtctctactctc 284
Query: 136 gactt 140
|||||
Sbjct: 285 gactt 289
>gnl|LJGI|TC68218 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 724
Score = 95.6 bits (48), Expect = 4e-19
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 40 tgccacattctctcttttctcccaaccgaggtagcaattgccacaagcgttctctcgaag 99
|||||||| |||||||||||||||||| || || ||||||||||| ||||||| |||
Sbjct: 157 tgccacatactctcttttctcccaaccaagcaagttgttgccacaagcattctctccaag 216
Query: 100 cggtggaagcctctatggcgttcagtccccactctcgacttcga 143
|| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 217 cgatggatgcctctatggcgttcagtttctactctcgacttcga 260
>gnl|LJGI|TC60968 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 1563
Score = 81.8 bits (41), Expect = 5e-15
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 16 agcatcttaccggacccaatcctgtgccacattctctcttttctcccaaccgaggtagca 75
|||| |||||| ||| ||||||| || ||| |||||||||||| ||||| || |||
Sbjct: 79 agcaccttaccagactcaatcctctgtttcatcctctcttttctctcaaccaagcaagcc 138
Query: 76 attgccacaagcgttctctcgaagcggtggaagcctctatggcgttcagtccccactctc 135
|||||| ||||| ||||| ||||||||| |||| || |||||||||||||||||||||
Sbjct: 139 gctgccaccagcgtcctctccaagcggtggcagccactgtggcgttcagtccccactctc 198
Query: 136 gactt 140
|||||
Sbjct: 199 gactt 203
>gnl|LJGI|TC63672 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 848
Score = 77.8 bits (39), Expect = 9e-14
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 414 cacaaatcttgtggttctcaagttgcatggtttaagcttgaaacctctttcctctgttga 473
|||||||||||||||||||||| || | || ||||| || | || |||||||||||||
Sbjct: 663 cacaaatcttgtggttctcaagctggaggggttaagattcacttctttttcctctgttga 722
Query: 474 ttttccctttcttaaaaccctgcatct 500
||||||||| |||||||||||| ||||
Sbjct: 723 ttttcccttccttaaaaccctgtatct 749
>gnl|LJGI|DC599890 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 598
Score = 73.8 bits (37), Expect = 1e-12
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 43 cacattctctcttttctcccaaccgaggtagcaattgccacaagcgttctctcgaagcgg 102
||||||||||||||||| |||||| | || ||| ||||||| |||||||| ||| ||
Sbjct: 77 cacattctctcttttcttccaacccaaaacgccattaccacaagtgttctctcaaagggg 136
Query: 103 tggaagcctctatggcgttcagtccccactctc 135
|||||||| |||||||||||||| || ||||||
Sbjct: 137 tggaagccactatggcgttcagttcctactctc 169
>gnl|LJGI|TC71396 weakly similar to UniRef100_Q501E9 Cluster: F-box/FBD/LRR-repeat
protein At3g51530; n=1; Arabidopsis thaliana|Rep:
F-box/FBD/LRR-repeat protein At3g51530 - Arabidopsis
thaliana (Mouse-ear cress), partial (11%)
Length = 748
Score = 60.0 bits (30), Expect = 2e-08
Identities = 115/142 (80%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 1 atggaagataggctcagcatcttaccggacccaatcctgtgccacattctctcttttctc 60
|||||||| ||| ||| || |||||| ||| | |||| |||||||||||||||| |||
Sbjct: 242 atggaagacagggtcaccaacttaccagacgaactcctctgccacattctctcttccctc 301
Query: 61 cca-accgaggtagcaattgccacaagcgttctctcgaagcggtggaagcctctatggcg 119
||| ||| | | ||| || ||||||| | ||||||| || || |||| |||||||||
Sbjct: 302 ccagaccaaagaagccatagccacaaccattctctccaaacgatggaccaatctatggcg 361
Query: 120 ttcagtccccactctcgacttc 141
||||||| ||||||||||||||
Sbjct: 362 ttcagtctccactctcgacttc 383
>gnl|LJGI|GO033933 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 636
Score = 58.0 bits (29), Expect = 8e-08
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 40 tgccacattctctcttttctcccaaccgaggtagcaattgccacaagcgttctctcgaag 99
|||||||| |||||||||||||||||| || |||| || ||| |||| ||||| |||
Sbjct: 128 tgccacatactctcttttctcccaaccctggaagcagttcgcacttgcgtcctctccaag 187
Query: 100 cggtggaagcctctatggcgttcagtccccactctcgacttcgac 144
| |||||| | || ||||||||||| | ||||||| ||||||||
Sbjct: 188 agatggaagacactgtggcgttcagttctcactctctacttcgac 232
>gnl|LJGI|TC82434 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 756
Score = 56.0 bits (28), Expect = 3e-07
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 35 tcctgtgccacattctctcttttctcccaaccgaggtagcaattgccacaagcgttctct 94
|||| |||||||||||| ||||||| ||| | ||| ||| |||| |||||||||||||
Sbjct: 177 tcctctgccacattctcagttttctcacaagcaaggaagccgttgcgacaagcgttctct 236
Query: 95 cgaagcggtggaagcctctatggcgttcagtccccactct 134
| | | |||||| || || |||||||| |||||||||||
Sbjct: 237 ccaggaggtggattccgctgtggcgttccgtccccactct 276
>gnl|LJGI|TC59854 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 848
Score = 52.0 bits (26), Expect = 5e-06
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 43 cacattctctcttttctcccaaccgaggtagcaattgccacaagcgttctctcgaagcgg 102
||||||||||| ||||||||||| | |||| || |||||||||||||||| |||||
Sbjct: 182 cacattctctcatttctcccaactcaacaagcagttaccacaagcgttctctcaaagcga 241
Query: 103 tggaagcctctatggcgttcagtccccactctcgacttcgac 144
||||| || || ||| ||||||||| |||||||| ||||
Sbjct: 242 tggaaacccctctggatctcagtccccgttctcgactacgac 283