Miyakogusa Predicted Gene
- Lj2g3v0571450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0571450.1 tr|G7I4M0|G7I4M0_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_1g042650 PE=4 SV=1,37.86,3e-19,domain in
FBox and BRCT domain containing pl,FBD; FAMILY NOT NAMED,NULL;
FBD,FBD,CUFF.34771.1
(417 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO005265 similar to UniRef100_A5N307 Cluster: Predicted... 785 0.0
gnl|LJGI|GO013243 117 6e-26
gnl|LJGI|TC74171 115 2e-25
gnl|LJGI|TC77415 109 1e-23
gnl|LJGI|TC65372 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik... 100 1e-20
gnl|LJGI|TC60968 weakly similar to UniRef100_A7QK65 Cluster: Chr... 98 5e-20
gnl|LJGI|BP071900 similar to UniRef100_Q858Q5 Cluster: ORF104; n... 92 3e-18
gnl|LJGI|FS357881 similar to UniRef100_A4VR91 Cluster: Protein i... 90 1e-17
gnl|LJGI|TC81149 90 1e-17
gnl|LJGI|TC66247 90 1e-17
gnl|LJGI|TC80357 88 5e-17
gnl|LJGI|TC76848 88 5e-17
gnl|LJGI|TC76014 similar to UniRef100_A0Q6X7 Cluster: Methionine... 76 2e-13
gnl|LJGI|BP076293 74 8e-13
gnl|LJGI|TC61418 weakly similar to UniRef100_Q9T0F1 Cluster: F-b... 66 2e-10
gnl|LJGI|TC82612 64 7e-10
gnl|LJGI|BP050969 56 2e-07
>gnl|LJGI|GO005265 similar to UniRef100_A5N307 Cluster: Predicted transporter protein;
n=1; Clostridium kluyveri DSM 555|Rep: Predicted
transporter protein - Clostridium kluyveri DSM 555,
partial (5%)
Length = 721
Score = 785 bits (396), Expect = 0.0
Identities = 410/417 (98%)
Strand = Plus / Plus
Query: 1 atgttccacaatttgacccatattaaacttgtctacagcaattataataataattgggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atgttccacaatttgacccatattaaacttgtctacagcaattataataataattgggct 166
Query: 61 gaagttgtggaattgctcaagtattgccccaagcttcaagttcttgtcattgaccagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gaagttgtggaattgctcaagtattgccccaagcttcaagttcttgtcattgaccagcca 226
Query: 121 gatgttcattttagtgggatagatgaattcaaagaagaagtaggtgtttggcaataccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gatgttcattttagtgggatagatgaattcaaagaagaagtaggtgtttggcaataccca 286
Query: 181 ccatgtgttcctgaatgcattctactacaccttaaaagatgttgtctaaatggttttata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ccatgtgttcctgaatgcattctactacaccttaaaagatgttgtctaaatggttttata 346
Query: 241 ggcaccaaaggcgagtttgagtttgcaaggtatataatgcagaaggcaagatttttacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ggcaccaaaggcgagtttgagtttgcaaggtatataatgcagaaggcaagatttttacag 406
Query: 301 aggatgacaatatccactggcatggacaaaaatcaatggggaaagcttgagctgttnnnn 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aggatgacaatatccactggcatggacaaaaatcaatggggaaagcttgagctgttaaaa 466
Query: 361 nnnttctacttatgcacgaggggctctgcaacttgtaaatttacctttagctgataa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aaattctacttatgcacgaggggctctgcaacttgtaaatttacctttagctgataa 523
>gnl|LJGI|GO013243
Length = 667
Score = 117 bits (59), Expect = 6e-26
Identities = 125/147 (85%)
Strand = Plus / Plus
Query: 188 ttcctgaatgcattctactacaccttaaaagatgttgtctaaatggttttataggcacca 247
||||||||||||||||| ||||||||| |||||| | |||||||| || || ||||||||
Sbjct: 170 ttcctgaatgcattctattacaccttagaagatgctatctaaatgattatagaggcacca 229
Query: 248 aaggcgagtttgagtttgcaaggtatataatgcagaaggcaagatttttacagaggatga 307
|| |||||| | ||||||| ||||| |||||||| |||||||||||| |||| |||
Sbjct: 230 aaccggagtttcaatttgcaaaatatattatgcagaaagcaagatttttaaagagcatgg 289
Query: 308 caatatccactggcatggacaaaaatc 334
| |||||||||||||| | ||||||||
Sbjct: 290 ccatatccactggcattgccaaaaatc 316
>gnl|LJGI|TC74171
Length = 595
Score = 115 bits (58), Expect = 2e-25
Identities = 124/146 (84%)
Strand = Plus / Plus
Query: 168 ttggcaatacccaccatgtgttcctgaatgcattctactacaccttaaaagatgttgtct 227
||||||||||||| ||| ||||||| ||||||||||| | ||||||||| ||| | |||
Sbjct: 230 ttggcaatacccatcatctgttcctaaatgcattctatttcaccttaaagaatgctatct 289
Query: 228 aaatggttttataggcaccaaaggcgagtttgagtttgcaaggtatataatgcagaaggc 287
|||| || || |||||||||||| |||||| |||||||||| ||||| |||| ||| |
Sbjct: 290 aaataattatagaggcaccaaaggtgagtttaagtttgcaagatatattatgcggaatgg 349
Query: 288 aagatttttacagaggatgacaatat 313
|||||||||| ||| |||||||||||
Sbjct: 350 aagatttttaaagaagatgacaatat 375
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 67 gtggaattgctcaagtattgccccaagcttcaagttcttgtcattgaccagcca 120
|||||||| |||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 132 gtggaatttctcaagtattgccccaagcttcaagttcttgtcattaaacagcca 185
>gnl|LJGI|TC77415
Length = 889
Score = 109 bits (55), Expect = 1e-23
Identities = 217/271 (80%)
Strand = Plus / Plus
Query: 42 ttataataataattgggctgaagttgtggaattgctcaagtattgccccaagcttcaagt 101
||||||| |||||||| || | || |||||||||||| || |||||||||||||||||||
Sbjct: 207 ttataatgataattggtctcaggtggtggaattgctccagcattgccccaagcttcaagt 266
Query: 102 tcttgtcattgaccagccagatgttcattttagtgggatagatgaattcaaagaagaagt 161
|||||||| | ||||||| || ||||| | | ||| ||| | |||| ||||||||
Sbjct: 267 tcttgtcactaaccagccgtattttcatcagactaagatgaatggaatcaatgaagaagt 326
Query: 162 aggtgtttggcaatacccaccatgtgttcctgaatgcattctactacaccttaaaagatg 221
||||| ||||||||| | || || | ||||||||||||| | ||||||||||||||||
Sbjct: 327 aggtgattggcaatatcgacgatcagatcctgaatgcattttgttacaccttaaaagatg 386
Query: 222 ttgtctaaatggttttataggcaccaaaggcgagtttgagtttgcaaggtatataatgca 281
| |||||||| || || |||||| | || |||||| | ||||||| |||||||||
Sbjct: 387 ctatctaaatgattatagaggcactagcggtgagtttcaatttgcaacatatataatggg 446
Query: 282 gaaggcaagatttttacagaggatgacaata 312
||| | |||| ||||| ||| ||||| ||||
Sbjct: 447 gaatggaagagttttagagaagatgagaata 477
>gnl|LJGI|TC65372 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (14%)
Length = 905
Score = 99.6 bits (50), Expect = 1e-20
Identities = 137/166 (82%)
Strand = Plus / Plus
Query: 169 tggcaatacccaccatgtgttcctgaatgcattctactacaccttaaaagatgttgtcta 228
||||||| ||||||| ||||||| ||||| ||||| |||||||||||||||| | ||||
Sbjct: 490 tggcaattaccaccatctgttcctcaatgccttctattacaccttaaaagatgctatcta 549
Query: 229 aatggttttataggcaccaaaggcgagtttgagtttgcaaggtatataatgcagaaggca 288
||| || || |||||||||| |||||||| |||||||| |||| ||||| || | |
Sbjct: 550 aatcattatagaggcaccaaacctgagtttgaatttgcaagatatagtatgcacaatgga 609
Query: 289 agatttttacagaggatgacaatatccactggcatggacaaaaatc 334
|| |||||| |||| ||||| ||||||||||| || | ||||||||
Sbjct: 610 aggtttttaaagagcatgaccatatccactggtattgccaaaaatc 655
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 68 tggaattgctcaagtattgccccaagcttcaagttcttgtcattgaccagccagatgttc 127
||||||||||| | ||||||||||||||||| |||||| ||| ||||||| ||| |||
Sbjct: 395 tggaattgctccatcattgccccaagcttcaacttcttgccataaaccagccggatattc 454
Query: 128 at 129
||
Sbjct: 455 at 456
>gnl|LJGI|TC60968 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 1563
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 41 attataataataattgggctgaagttgtggaattgctcaagtattgccccaagcttcaag 100
||||||||||| ||||| |||| || |||||||||||||||| |||||||| ||||||||
Sbjct: 974 attataataatgattggtctgaggtagtggaattgctcaagtcttgccccatgcttcaag 1033
Query: 101 ttcttgtcattgaccag 117
||||||||||| |||||
Sbjct: 1034 ttcttgtcatttaccag 1050
>gnl|LJGI|BP071900 similar to UniRef100_Q858Q5 Cluster: ORF104; n=1; Vibrio phage
VGJphi|Rep: ORF104 - Vibrio phage VGJphi, partial (15%)
Length = 480
Score = 91.7 bits (46), Expect = 3e-18
Identities = 103/122 (84%)
Strand = Plus / Minus
Query: 1 atgttccacaatttgacccatattaaacttgtctacagcaattataataataattgggct 60
||||| ||||||||||||||||| |||||| ||| | ||| |||| | ||||| ||
Sbjct: 440 atgtttcacaatttgacccatatgcaacttgactatattgattgcaatattgattggtct 381
Query: 61 gaagttgtggaattgctcaagtattgccccaagcttcaagttcttgtcattgaccagcca 120
|| || ||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 380 gatgtagtggagttgatcaagaattgccccaagcttcaagttcttgtcatttaccagcca 321
Query: 121 ga 122
||
Sbjct: 320 ga 319
>gnl|LJGI|FS357881 similar to UniRef100_A4VR91 Cluster: Protein involved in catabolism
of external DNA; n=1; Pseudomonas stutzeri A1501|Rep:
Protein involved in catabolism of external DNA -
Pseudomonas stutzeri (strain A1501), partial (8%)
Length = 723
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 157 gaagtaggtgtttggcaatacccaccatgtgttcctgaatgcattctactacaccttaaa 216
|||||||||| ||||||| |||||| || || | ||||||||||| | |||||||||||
Sbjct: 414 gaagtaggtgattggcaacacccacaatctgatactgaatgcattttggtacaccttaaa 355
Query: 217 agatgttgtctaaatggttttataggcaccaaaggcgagtttgagtttgcaaggtatata 276
||||||| |||||||||||||| ||||| || |||||| | |||||||| ||||||
Sbjct: 354 agatgttatctaaatggttttagaggcaaaccagttgagtttcaatttgcaagatatata 295
Query: 277 atgcagaaggcaagatttttacagaggatgacaatat 313
|||| ||| | |||| | ||| ||| ||||| |||||
Sbjct: 294 atgcggaatggaagagtattagagaagatgagaatat 258
>gnl|LJGI|TC81149
Length = 438
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 168 ttggcaatacccaccatgtgttcctgaatgcattctactacaccttaaaagatgttgtct 227
||||||| ||||||||| ||||||| ||||||||||||||||||||||| || | |||
Sbjct: 61 ttggcaagacccaccatctgttcctaaatgcattctactacaccttaaagtttgctatct 120
Query: 228 aaatggttttataggcaccaaaggcgagtttgagtttgcaaggtatataatgc 280
||||| || || |||||||||||| ||| || | |||||||| ||||| ||||
Sbjct: 121 aaatgattatagaggcaccaaaggtgagcttcaatttgcaagatatattatgc 173
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 372 atgcacgaggggctctgcaacttgtaaatttaccttta 409
|||||||||| |||||||||||||||||||| ||||||
Sbjct: 267 atgcacgaggcgctctgcaacttgtaaattttccttta 304
>gnl|LJGI|TC66247
Length = 631
Score = 89.7 bits (45), Expect = 1e-17
Identities = 105/125 (84%)
Strand = Plus / Plus
Query: 189 tcctgaatgcattctactacaccttaaaagatgttgtctaaatggttttataggcaccaa 248
|||||||||||||||| ||||||||||||| || | |||||||| || || ||||||| |
Sbjct: 367 tcctgaatgcattctattacaccttaaaagttgctatctaaatgattatagaggcaccga 426
Query: 249 aggcgagtttgagtttgcaaggtatataatgcagaaggcaagatttttacagaggatgac 308
||| ||| || | |||||||| ||||| | ||||| | ||| |||||| ||||||||||
Sbjct: 427 aggtgagcttcaatttgcaagatatattctccagaatggaaggtttttaaagaggatgac 486
Query: 309 aatat 313
|||||
Sbjct: 487 aatat 491
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 70 gaattgctcaagtattgccccaagcttcaagttctt 105
||||| ||||||||||||||||||||||||||||||
Sbjct: 251 gaatttctcaagtattgccccaagcttcaagttctt 286
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 372 atgcacgaggggctctgcaacttgtaaatttacctttagctgataa 417
|||||||||| ||||| ||||||||||| || |||||| |||||||
Sbjct: 550 atgcacgaggagctctacaacttgtaaactttcctttaactgataa 595
>gnl|LJGI|TC80357
Length = 742
Score = 87.7 bits (44), Expect = 5e-17
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 168 ttggcaatacccaccatgtgttcctgaatgcattctactacaccttaaaagatgttgtct 227
||||||||||||| ||| ||||||||||||||||||||| ||||| ||| ||| |||||
Sbjct: 348 ttggcaatacccatcatctgttcctgaatgcattctactgcacctcaaagaatgctgtct 407
Query: 228 aaatggttttataggcaccaaaggcgagtttgagtttgcaaggtatat 275
|||| || || |||||| ||||| ||||| ||||||||| ||||||
Sbjct: 408 aaatcattatagaggcacaaaaggtgagttacagtttgcaaagtatat 455
Score = 73.8 bits (37), Expect = 8e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 68 tggaattgctcaagtattgccccaagcttcaagttcttgtcattgaccagcca 120
||||||| ||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct: 254 tggaatttctcaagtattgccccaagcttgaagttcttgtcattaaacagcca 306
>gnl|LJGI|TC76848
Length = 501
Score = 87.7 bits (44), Expect = 5e-17
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 7 cacaatttgacccatattaaacttgtctacagcaattataataataattgggctgaagtt 66
||||||||||||||||| |||||| ||| | ||| |||| | ||||| |||| ||
Sbjct: 37 cacaatttgacccatatgcaacttgactatattgattgcaatattgattggtctgatgta 96
Query: 67 gtggaattgctcaagtattgccccaagcttcaagttcttgtcattgaccagccaga 122
||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 97 gtggagttgatcaagaattgccccaagcttcaagttcttgtcatttaccagccaga 152
>gnl|LJGI|TC76014 similar to UniRef100_A0Q6X7 Cluster: Methionine uptake transporter
(MUT) family protein; n=2; Francisella tularensis subsp.
novicida|Rep: Methionine uptake transporter (MUT) family
protein - Francisella tularensis subsp. novicida (strain
U112), partial (5%)
Length = 691
Score = 75.8 bits (38), Expect = 2e-13
Identities = 107/130 (82%)
Strand = Plus / Plus
Query: 168 ttggcaatacccaccatgtgttcctgaatgcattctactacaccttaaaagatgttgtct 227
|||||||| ||||| || ||||||||||| ||||||| ||| ||||||||||| | |||
Sbjct: 240 ttggcaatgcccacaatctgttcctgaatacattctattacggcttaaaagatgctatct 299
Query: 228 aaatggttttataggcaccaaaggcgagtttgagtttgcaaggtatataatgcagaaggc 287
||||| | || |||||||| || |||||| | |||||||| ||||| |||||||| |
Sbjct: 300 aaatgagtatagaggcaccagagctgagtttcaatttgcaagatatattatgcagaatgg 359
Query: 288 aagattttta 297
|| |||||||
Sbjct: 360 aatattttta 369
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 67 gtggaattgctcaagtattgccccaagcttcaagttcttgtcattgaccagcca 120
||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||
Sbjct: 151 gtggagttgctcaagtattgcccccagcttcaagttctcgtcataaaccagcca 204
>gnl|LJGI|BP076293
Length = 485
Score = 73.8 bits (37), Expect = 8e-13
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 189 tcctgaatgcattctactacaccttaaaagatgttgtctaaatggttttataggcaccaa 248
|||||||||||||| | |||||||||||||||| | |||||||| || || |||||| |
Sbjct: 443 tcctgaatgcattcaattacaccttaaaagatgctatctaaatgattatagaggcactga 384
Query: 249 aggcgagtttgagtttgcaaggtatataatgcagaaggcaagatttttacagaggatgac 308
||| |||||| | |||||||| ||||| | ||||| | |||| ||||| |||| ||||
Sbjct: 383 aggtgagtttcaatttgcaagatatattctccagaatggaagagttttagagagcatgat 324
Query: 309 aatat 313
|||||
Sbjct: 323 aatat 319
>gnl|LJGI|TC61418 weakly similar to UniRef100_Q9T0F1 Cluster: F-box protein
At4g09920; n=1; Arabidopsis thaliana|Rep: F-box protein
At4g09920 - Arabidopsis thaliana (Mouse-ear cress),
partial (5%)
Length = 740
Score = 65.9 bits (33), Expect = 2e-10
Identities = 126/157 (80%)
Strand = Plus / Plus
Query: 157 gaagtaggtgtttggcaatacccaccatgtgttcctgaatgcattctactacaccttaaa 216
|||||||| || |||||||||||| | |||| || |||||||||||| ||||||||||
Sbjct: 416 gaagtaggatttgggcaatacccactacatgtttctaaatgcattctacgacaccttaaa 475
Query: 217 agatgttgtctaaatggttttataggcaccaaaggcgagtttgagtttgcaaggtatata 276
||| | | |||||| || | |||||| ||||| |||||| | |||||||| |||||
Sbjct: 476 gaatgctatttaaatgattatcgaggcacaaaaggtgagtttcaatttgcaagatatatt 535
Query: 277 atgcagaaggcaagatttttacagaggatgacaatat 313
|||| ||| | ||| ||||| |||||||| ||||||
Sbjct: 536 atgcggaatggaagggttttaaagaggatgtcaatat 572
>gnl|LJGI|TC82612
Length = 505
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 70 gaattgctcaagtattgccccaagcttcaagttcttgtcattgaccag 117
|||||||||||| |||||||||| ||||||||||| |||||| |||||
Sbjct: 165 gaattgctcaagcattgccccaaacttcaagttctagtcattaaccag 212
>gnl|LJGI|BP050969
Length = 557
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 157 gaagtaggtgtttggcaatacccaccatgtgttcctgaatgcattctactacaccttaaa 216
|||||||| || |||||||||||| | ||||||| |||||||||||| ||||||||||
Sbjct: 153 gaagtaggatttgggcaatacccactacatgttcctaaatgcattctacgacaccttaaa 94