Miyakogusa Predicted Gene

Lj2g3v0561110.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0561110.1 Non Chatacterized Hit- tr|B6U779|B6U779_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,47.78,0.00000000000003,seg,NULL,CUFF.34710.1
         (1170 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62276                                                     1310   0.0  
gnl|LJGI|TC76169                                                      660   0.0  

>gnl|LJGI|TC62276 
          Length = 787

 Score = 1310 bits (661), Expect = 0.0
 Identities = 670/672 (99%), Gaps = 2/672 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagaagaagcttcaaatcgcaaccctctccttccgctccattcgcttcctcactccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atgcagaagaagcttcaaatcgcaaccctctccttccgctccattcgcttcctcactccc 177

                                                                       
Query: 61  aaacccaatcacttgtcctttgaggtatgcgattctgttggtccatcaaatgtgaagtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 aaacccaatcacttgtcctttgaggtatgcgattctgttggtccatcaaatgtgaagtgg 237

                                                                       
Query: 121 cgtgggttgtcatatgctgctgcttcttctgccccttctgagccaccggagtctcagaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cgtgggttgtcatatgctgctgcttcttctgccccttctgagccaccggagtctcagaaa 297

                                                                       
Query: 181 ggtcgaaagagggtttcgaaacagcaacggcgagctatagtggagtcctttgtgaacaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggtcgaaagagggtttcgaaacagcaacggcgagctatagtggagtcctttgtgaacaag 357

                                                                       
Query: 241 cacagatcagagaatgctgggaaattcccgacaataactgatattcaaaaacaagttggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cacagatcagagaatgctgggaaattcccgacaataactgatattcaaaaacaagttggt 417

                                                                       
Query: 301 ggtggtttttattcgatccgggaaatcattaaggaactagaatacaagtccaaaatgaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ggtggtttttattcgatccgggaaatcattaaggaactagaatacaagtccaaaatgaaa 477

                                                                       
Query: 361 tcttcaaacaacaaggatgagattttgttggaaaagctaattgataaaagtaaacgtgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tcttcaaacaacaaggatgagattttgttggaaaagctaattgataaaagtaaacgtgag 537

                                                                       
Query: 421 accactgaatcggtcattgtttcatctgataatattgagacttcaagagaaaagcctttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 accactgaatcggtcattgtttcatctgataatattgagacttcaagagaaaagcctttc 597

                                                                       
Query: 481 caagatgattctctgccggttcttatagatggcaaagagactgttagtactggttatgaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 caagatgattctctgccggttcttatagatggcaaagagactgttagtactggttatgaa 657

                                                                       
Query: 541 catcttgaagaaagtctttctgctccgtctagtgaaaattatagtaatactcagggccaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 catcttgaagaaagtctttctgctccgtctagtgaaaattatagtaatactcagggccaa 717

                                                                       
Query: 601 gaatctgaatttgttgataccgaaaatcataaaaaattggaggaaaaatgcattaatgaa 660
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 718 gaatctgaatttgttgataccgaaaatcataaaaaattggag--aaaatgcattaatgaa 775

                       
Query: 661 gaaagttatgag 672
           ||||||||||||
Sbjct: 776 gaaagttatgag 787


>gnl|LJGI|TC76169 
          Length = 743

 Score =  660 bits (333), Expect = 0.0
 Identities = 339/341 (99%)
 Strand = Plus / Plus

                                                                        
Query: 830  tttttgctccatcttttggaaaatctggcaataagcacagcgaaggtcagagctatcagg 889
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tttttgctccatcttttggaaaatctggcaataagcacagcgaaggtcagagctatcagg 60

                                                                        
Query: 890  ctgttgacatagaaaaccatctaacaattgagaagaagagctttaagaaagcaggacttg 949
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61   ctgttgacatagaaaaccatctaacaattgagaagaagggctttaagaaagcaggacttg 120

                                                                        
Query: 950  agagaaaagagcaagatgtcttaaaagaccttcccgatgtggttagtcaaaagaataaaa 1009
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agagaaaagagcaagatgtcttaaaagaccttcccgatgtggttagtcaaaagaataaaa 180

                                                                        
Query: 1010 tggagcaatctcatgggtctttagaattggatgaatccaaaatggatagctctgataata 1069
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tggagcaatctcatgggtctttagaattggatgaatccaaaatggatagctctgataata 240

                                                                        
Query: 1070 gggagccagctggtttagtggtctcggagaaatcaactttgtggggaaatctgaaatcat 1129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gggagccagctggtttagtggtctcggagaaatcaactttgtggggaaatctgaaatcat 300

                                                     
Query: 1130 ttgcagatggcatcattaatatctggagaaaattctgaagc 1170
            |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301  ttgcagatggtatcattaatatctggagaaaattctgaagc 341