Miyakogusa Predicted Gene

Lj2g3v0535750.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0535750.2 Non Chatacterized Hit- tr|I3SMC1|I3SMC1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,90.32,0.00000007,
,CUFF.34695.2
         (201 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74248 similar to UniRef100_A7P4H9 Cluster: Chromosome...   147   3e-35
gnl|LJGI|TC58225 similar to UniRef100_A7P4H9 Cluster: Chromosome...   147   3e-35
gnl|LJGI|FS355360 weakly similar to UniRef100_Q3E7F4 Cluster: Un...   101   2e-21

>gnl|LJGI|TC74248 similar to UniRef100_A7P4H9 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 890

 Score =  147 bits (74), Expect = 3e-35
 Identities = 80/82 (97%)
 Strand = Plus / Plus

                                                                       
Query: 43  aatgaggcaacaccaggaagtgttaagtcagttttcaaagcttgggacgaccgtttgaat 102
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 182 aatgaggcaacaccaggaagtgttaagtcagttttcaaagcttgggaagaccgtttgaat 241

                                 
Query: 103 tcttctggggatcacttggaaa 124
           |||||||||| |||||||||||
Sbjct: 242 tcttctgggggtcacttggaaa 263


>gnl|LJGI|TC58225 similar to UniRef100_A7P4H9 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 789

 Score =  147 bits (74), Expect = 3e-35
 Identities = 80/82 (97%)
 Strand = Plus / Plus

                                                                       
Query: 43  aatgaggcaacaccaggaagtgttaagtcagttttcaaagcttgggacgaccgtttgaat 102
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 129 aatgaggcaacaccaggaagtgttaagtcagttttcaaagcttgggaagaccgtttgaat 188

                                 
Query: 103 tcttctggggatcacttggaaa 124
           |||||||||| |||||||||||
Sbjct: 189 tcttctgggggtcacttggaaa 210


>gnl|LJGI|FS355360 weakly similar to UniRef100_Q3E7F4 Cluster: Uncharacterized protein
           At1g04020.2; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At1g04020.2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (12%)
          Length = 658

 Score =  101 bits (51), Expect = 2e-21
 Identities = 72/79 (91%)
 Strand = Plus / Minus

                                                                       
Query: 123 aaccaagggtgtaacggtggcccaaacactggcagacttagcgctctggccaataagcca 182
           |||||||||||||| |||||||||||  ||||||||||||| ||| |||||||| |||||
Sbjct: 582 aaccaagggtgtaatggtggcccaaaagctggcagacttagtgctttggccaatgagcca 523

                              
Query: 183 aagctattcagtggcttaa 201
           |||||||| ||||||||||
Sbjct: 522 aagctatttagtggcttaa 504