Miyakogusa Predicted Gene
- Lj2g3v0533480.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0533480.2 Non Chatacterized Hit- tr|F6HGJ5|F6HGJ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,68.06,1e-16,seg,NULL,CUFF.34672.2
(217 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74218 similar to UniRef100_A7QR15 Cluster: Chromosome... 422 e-118
gnl|LJGI|TC65858 similar to UniRef100_A7QR15 Cluster: Chromosome... 422 e-118
gnl|LJGI|TC62577 similar to UniRef100_A7QR15 Cluster: Chromosome... 54 4e-07
>gnl|LJGI|TC74218 similar to UniRef100_A7QR15 Cluster: Chromosome undetermined
scaffold_147, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_147,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (56%)
Length = 887
Score = 422 bits (213), Expect = e-118
Identities = 216/217 (99%)
Strand = Plus / Plus
Query: 1 atggcttatgtggatgatgatgatgcttctacggactctggagatgatgtgaacatgttg 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atggcttatgtggatgatgacgatgcttctacggactctggagatgatgtgaacatgttg 105
Query: 61 ttggatggacacaagcgtcgggcgggtgtgccgtcgggttctaatggtggccggaagcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ttggatggacacaagcgtcgggcgggtgtgccgtcgggttctaatggtggccggaagcga 165
Query: 121 ggaaggaaagctactggcagtgctatagtggatgctatgatggagattgcggctgcttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ggaaggaaagctactggcagtgctatagtggatgctatgatggagattgcggctgcttcg 225
Query: 181 aagatgagggctagcgcgattgtgaagaatgaggaca 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 226 aagatgagggctagcgcgattgtgaagaatgaggaca 262
>gnl|LJGI|TC65858 similar to UniRef100_A7QR15 Cluster: Chromosome undetermined
scaffold_147, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_147,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 608
Score = 422 bits (213), Expect = e-118
Identities = 216/217 (99%)
Strand = Plus / Plus
Query: 1 atggcttatgtggatgatgatgatgcttctacggactctggagatgatgtgaacatgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggcttatgtggatgatgatgatgcttctacggactctggagatgatgtgaacatgttg 127
Query: 61 ttggatggacacaagcgtcgggcgggtgtgccgtcgggttctaatggtggccggaagcga 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ttggatggacacaagcgtcaggcgggtgtgccgtcgggttctaatggtggccggaagcga 187
Query: 121 ggaaggaaagctactggcagtgctatagtggatgctatgatggagattgcggctgcttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ggaaggaaagctactggcagtgctatagtggatgctatgatggagattgcggctgcttcg 247
Query: 181 aagatgagggctagcgcgattgtgaagaatgaggaca 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 248 aagatgagggctagcgcgattgtgaagaatgaggaca 284
>gnl|LJGI|TC62577 similar to UniRef100_A7QR15 Cluster: Chromosome undetermined
scaffold_147, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_147,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 736
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 145 atagtggatgctatgatggagattgcggctgcttcgaagatgagggc 191
||||| ||||| ||| ||||||| || ||||||||||||||||||||
Sbjct: 368 atagttgatgccatgctggagatagcagctgcttcgaagatgagggc 414