Miyakogusa Predicted Gene
- Lj2g3v0523450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0523450.1 tr|G7KHS6|G7KHS6_MEDTR 4,5-DOPA dioxygenase
extradiol-like protein OS=Medicago truncatula
GN=MTR_6g0,72.41,1e-16,LigB,Extradiol ring-cleavage dioxygenase, class
III enzyme, subunit B; LigB subunit of an aromatic-r,CUFF.34670.1
(804 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59688 1594 0.0
gnl|LJGI|TC76623 similar to UniRef100_A7QR19 Cluster: Chromosome... 815 0.0
gnl|LJGI|TC58137 similar to UniRef100_Q949R4 Cluster: 4,5-DOPA d... 145 5e-34
gnl|LJGI|TC62853 similar to UniRef100_Q949R4 Cluster: 4,5-DOPA d... 94 2e-18
>gnl|LJGI|TC59688
Length = 1159
Score = 1594 bits (804), Expect = 0.0
Identities = 804/804 (100%)
Strand = Plus / Plus
Query: 1 atggcgttaaaggacacgttttacatatcccatggatcacccactttgtccatagacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atggcgttaaaggacacgttttacatatcccatggatcacccactttgtccatagacgag 149
Query: 61 tcccttgtggctaggaagttcctccaatcgtggaagaaggaggtgtttccgccgagaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tcccttgtggctaggaagttcctccaatcgtggaagaaggaggtgtttccgccgagaccc 209
Query: 121 acttccattcttgtcatctccggccattgggacaccgctgtccccaccgttaacgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 acttccattcttgtcatctccggccattgggacaccgctgtccccaccgttaacgttgtt 269
Query: 181 gattccaccaacgacaccatctatgacttctatggcttccccaaacccatgtaccagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gattccaccaacgacaccatctatgacttctatggcttccccaaacccatgtaccagctt 329
Query: 241 aaatatccagcacctggagctcctcatttggcaaagagggtgaaggagctactgaaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aaatatccagcacctggagctcctcatttggcaaagagggtgaaggagctactgaaagaa 389
Query: 301 ggtggtttcagccgcgtcgatgaagataaaaaacgcggcctcgaccacggtgcttgggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggtggtttcagccgcgtcgatgaagataaaaaacgcggcctcgaccacggtgcttgggtt 449
Query: 361 ccactccttttgatgtatccagaagctgacatcccagtttgtcagctatctgttcaatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ccactccttttgatgtatccagaagctgacatcccagtttgtcagctatctgttcaatct 509
Query: 421 aacctggatgggactcatcattataacataggaaaggcactggcccctcttaaagatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aacctggatgggactcatcattataacataggaaaggcactggcccctcttaaagatgaa 569
Query: 481 ggtgtacttatagtgggttctggaagtgcagttcacaacttgagagcactcgagcgccac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ggtgtacttatagtgggttctggaagtgcagttcacaacttgagagcactcgagcgccac 629
Query: 541 gccactgttgcggcgccctgggctgtagagtttgataattggctgaaagaagctcttctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gccactgttgcggcgccctgggctgtagagtttgataattggctgaaagaagctcttctt 689
Query: 601 gaaggaagatatgaagatgtgaatcactatgaacaaaaagcaccacatgcaaaaaaggct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gaaggaagatatgaagatgtgaatcactatgaacaaaaagcaccacatgcaaaaaaggct 749
Query: 661 catccttggccggatcacttttacccactgcatgttgctattggtgctgctggtgaaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 catccttggccggatcacttttacccactgcatgttgctattggtgctgctggtgaaaat 809
Query: 721 tcaaaggccaaactcatccatagcagcattgacttgggaagtctctcttatgcctcttac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tcaaaggccaaactcatccatagcagcattgacttgggaagtctctcttatgcctcttac 869
Query: 781 cagtttacatcagatgtcatctaa 804
||||||||||||||||||||||||
Sbjct: 870 cagtttacatcagatgtcatctaa 893
>gnl|LJGI|TC76623 similar to UniRef100_A7QR19 Cluster: Chromosome undetermined
scaffold_147, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_147,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (65%)
Length = 645
Score = 815 bits (411), Expect = 0.0
Identities = 421/423 (99%), Gaps = 1/423 (0%)
Strand = Plus / Plus
Query: 1 atggcgttaaaggacacgttttacatatcccatggatcacccactttgtccatagacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 atggcgttaaaggacacgttttacatatcccatggatcacccactttgtccatagacgag 282
Query: 61 tcccttgtggctaggaagttcctccaatcgtggaagaaggaggtgtttccgccgagaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcccttgtggctaggaagttcctccaatcgtggaagaaggaggtgtttccgccgagaccc 342
Query: 121 acttccattcttgtcatctccggccattgggacaccgctgtccccaccgttaacgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 acttccattcttgtcatctccggccattgggacaccgctgtccccaccgttaacgttgtt 402
Query: 181 gattccaccaacgacaccatctatgacttctatggcttccccaaacccatgtaccagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gattccaccaacgacaccatctatgacttctatggcttccccaaacccatgtaccagctt 462
Query: 241 aaatatccagcacctgga-gctcctcatttggcaaagagggtgaaggagctactgaaaga 299
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aaatatccagcaccgggaggctcctcatttggcaaagagggtgaaggagctactgaaaga 522
Query: 300 aggtggtttcagccgcgtcgatgaagataaaaaacgcggcctcgaccacggtgcttgggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aggtggtttcagccgcgtcgatgaagataaaaaacgcggcctcgaccacggtgcttgggt 582
Query: 360 tccactccttttgatgtatccagaagctgacatcccagtttgtcagctatctgttcaatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tccactccttttgatgtatccagaagctgacatcccagtttgtcagctatctgttcaatc 642
Query: 420 taa 422
|||
Sbjct: 643 taa 645
>gnl|LJGI|TC58137 similar to UniRef100_Q949R4 Cluster: 4,5-DOPA dioxygenase
extradiol-like protein; n=1; Arabidopsis thaliana|Rep:
4,5-DOPA dioxygenase extradiol-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (90%)
Length = 1175
Score = 145 bits (73), Expect = 5e-34
Identities = 315/395 (79%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 91 tggaagaaggaggtgtttccgccgagacccacttccattcttgtcatctccggccattgg 150
|||||| ||||||||||||| | ||||| ||||||| || ||||||||||||| |||
Sbjct: 329 tggaaggaggaggtgtttccacatcgaccctcttccatcctcatcatctccggccactgg 388
Query: 151 gacaccgctgtccccaccgttaacgttgttgattccaccaacgacaccatctatgacttc 210
|||||| |||||||||||| |||| ||||| | || ||||||||||| || |||
Sbjct: 389 gacacccatgtccccaccgtcaacgccgttga---ccggaatgacaccatctacgatttc 445
Query: 211 tatggcttccccaaacccatgtaccagcttaaatatccagcacctggagctcctcatttg 270
||||| ||||||||| ||||||| |||| || || |||||||| || |||| || |||
Sbjct: 446 tatggtttccccaaaaacatgtacaagctcaagtacccagcaccaggtgctctacacttg 505
Query: 271 gcaaagagggtgaaggagctactgaaagaaggtggtttcagccgcgtcgatgaagataaa 330
||||||||||||||||| ||||| || | || |||||||| || ||||||||||
Sbjct: 506 gcaaagagggtgaaggaactactcgcagcatcagggttcagccgtgtggatgaagatagg 565
Query: 331 aaacgcggcctcgaccacggtgcttgggttccactccttttgatgtatccagaagctgac 390
||||| || || ||||| || ||||||||||| ||| | |||||||| ||||| || |||
Sbjct: 566 aaacgtgggcttgaccatggagcttgggttcctctcatgttgatgtacccagatgcagac 625
Query: 391 atcccagtttgtcagctatctgttcaatctaacctggatgggactcatcattataacata 450
|||||||| ||||| || || || ||| | | ||| ||| ||| |||| ||| | ||
Sbjct: 626 atcccagtgtgtcaactctcagtctcatcaagcatgggtggtacttatcactatgaaatg 685
Query: 451 ggaaaggcactggcccctcttaaagatgaaggtgt 485
||||||||| |||| |||||||| |||||||||||
Sbjct: 686 ggaaaggcattggctcctcttaaggatgaaggtgt 720
Score = 79.8 bits (40), Expect = 2e-14
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 593 ctcttcttgaaggaagatatgaagatgtgaatcactatgaacaaaaagcaccacatgcaa 652
|||||||| | |||||||||||||| || ||||| |||||| | || || ||| ||||||
Sbjct: 828 ctcttcttcatggaagatatgaagaagtaaatcaatatgaagagaaggcgccatatgcaa 887
Query: 653 aaaaggctcatccttggccggatcactt 680
||| ||||||||| ||||||||||||||
Sbjct: 888 aaatggctcatccatggccggatcactt 915
>gnl|LJGI|TC62853 similar to UniRef100_Q949R4 Cluster: 4,5-DOPA dioxygenase
extradiol-like protein; n=1; Arabidopsis thaliana|Rep:
4,5-DOPA dioxygenase extradiol-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (63%)
Length = 819
Score = 93.7 bits (47), Expect = 2e-18
Identities = 191/239 (79%)
Strand = Plus / Plus
Query: 247 ccagcacctggagctcctcatttggcaaagagggtgaaggagctactgaaagaaggtggt 306
|||||||| || |||| || |||||||||||||||||||| ||||| | || | ||
Sbjct: 46 ccagcaccaggtgctctacacttggcaaagagggtgaaggaactactcacagcatcaggg 105
Query: 307 ttcagccgcgtcgatgaagataaaaaacgcggcctcgaccacggtgcttgggttccactc 366
|||||||| || |||||||||| ||||| || || ||||| || ||||||||||| |||
Sbjct: 106 ttcagccgtgtggatgaagataggaaacgtgggcttgaccatggagcttgggttcctctc 165
Query: 367 cttttgatgtatccagaagctgacatcccagtttgtcagctatctgttcaatctaacctg 426
| |||||||| ||||| || ||||||||||| ||||| || || || ||| | | ||
Sbjct: 166 atgttgatgtacccagatgcagacatcccagtgtgtcaactctcagtctcatcaagcatg 225
Query: 427 gatgggactcatcattataacataggaaaggcactggcccctcttaaagatgaaggtgt 485
| ||| ||| |||| ||| | || ||||||||| |||| |||||||| |||||||||||
Sbjct: 226 ggtggtacttatcactatgaaatgggaaaggcattggctcctcttaaggatgaaggtgt 284
Score = 79.8 bits (40), Expect = 2e-14
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 593 ctcttcttgaaggaagatatgaagatgtgaatcactatgaacaaaaagcaccacatgcaa 652
|||||||| | |||||||||||||| || ||||| |||||| | || || ||| ||||||
Sbjct: 392 ctcttcttcatggaagatatgaagaagtaaatcaatatgaagagaaggcgccatatgcaa 451
Query: 653 aaaaggctcatccttggccggatcactt 680
||| ||||||||| ||||||||||||||
Sbjct: 452 aaatggctcatccatggccggatcactt 479