Miyakogusa Predicted Gene
- Lj2g3v0523270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0523270.1 Non Chatacterized Hit- tr|I1L1I2|I1L1I2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,31.28,7e-19,seg,NULL; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide
repe,CUFF.34657.1
(861 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP042107 weakly similar to UniRef100_Q1SMZ4 Cluster: Te... 557 e-158
gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Ch... 266 2e-70
gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Ch... 242 3e-63
gnl|LJGI|TC62388 weakly similar to UniRef100_A7Q622 Cluster: Chr... 167 1e-40
gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Ch... 151 8e-36
gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Ch... 84 2e-15
gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Ch... 84 2e-15
>gnl|LJGI|BP042107 weakly similar to UniRef100_Q1SMZ4 Cluster: Tetratricopeptide-like
helical; n=1; Medicago truncatula|Rep:
Tetratricopeptide-like helical - Medicago truncatula
(Barrel medic), partial (11%)
Length = 515
Score = 557 bits (281), Expect = e-158
Identities = 305/313 (97%)
Strand = Plus / Plus
Query: 275 atgatgctgtctctttcttcaatcgcttgctccaaatgcatcctaccccttccatcatcg 334
||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 203 atgatgctgtctccttcttcaaccgcatgctccaaatgcatcctaccccttccatcatcg 262
Query: 335 aatttagtatgattttaacttccctactgaagatgaagcattactccactgccatatccc 394
|||||||||||||||||||||||||| | |||||||||||||||||||| ||||| || |
Sbjct: 263 aatttagtatgattttaacttccctagtcaagatgaagcattactccaccgccatttcac 322
Query: 395 tttctcaccaaatggaacttaagggaattaggcctgacattgtcacttccagcatcttga 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttctcaccaaatggaacttaagggaattaggcctgacattgtcacttccagcatcttga 382
Query: 455 tcaattgttactgccacttaggtcaacttacttcagctttttctgtaatgggaaacattc 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcaattgttactgccacttaggtcaacttacttcagctttttctgtaatgggaaacattc 442
Query: 515 tcaagagaggttatcagccaaacactatcatcttgaatacacttatgaaaggtctctgtc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcaagagaggttatcagccaaacactatcatcttgaatacacttatgaaaggtctctgtc 502
Query: 575 ttaaaggcatggt 587
|||||||||||||
Sbjct: 503 ttaaaggcatggt 515
Score = 188 bits (95), Expect = 4e-47
Identities = 128/135 (94%), Gaps = 3/135 (2%)
Strand = Plus / Plus
Query: 52 agacagagcagcatggtagtcaagcctagcacttttggaatgatgctcggtgttgttggt 111
|||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 1 agacagagcagcgtggtagtcaagcctagcacttt-ggaatgatgctcggtgttgt-ggt 58
Query: 112 gtggtgagtagagcacatcacatatcaacgaaaattgctgcaatgtcatcatcgtcatta 171
|||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 59 gtggtgagcagagcacatcacatatcaacgaaaa-tgctgcaatgtcatcatcgtcattg 117
Query: 172 ttcagattaacgagg 186
|| ||||||||||||
Sbjct: 118 tttagattaacgagg 132
>gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 766
Score = 266 bits (134), Expect = 2e-70
Identities = 451/559 (80%), Gaps = 12/559 (2%)
Strand = Plus / Plus
Query: 275 atgatgctgtctctttcttcaatcgcttgctccaaatgcatcctaccccttccatcatcg 334
||||||| || || || ||||| ||||||||||||| | ||||||||| ||||||||||
Sbjct: 152 atgatgccgtatccttattcaaccgcttgctccaaacgagtcctaccccatccatcatcg 211
Query: 335 aatttagtatgattttaacttccctactgaagatgaagcattactccactgccatatccc 394
||||| ||| ||||||||| |||| ||||||||||||||||| ||||||| || ||||
Sbjct: 212 aatttggtaagattttaaccaccctcgtgaagatgaagcattaccccactgctatttccc 271
Query: 395 tttctcaccaaatggaacttaagggaattaggcctgacattgtcacttccagcatcttga 454
||||||||||||||||| ||||||||||| || ||||||| ||| ||||||||||
Sbjct: 272 tttctcaccaaatggaatctaagggaattatttctaacattgttactatgagcatcttga 331
Query: 455 tcaattgttactgccacttaggtcaacttacttcagctttttctgtaatgggaaacattc 514
||||||||||||||||| |||||||| | ||| || ||||||||| | | || |||
Sbjct: 332 tcaattgttactgccacataggtcaaatacctttcgccttttctgtactcgctaaacttc 391
Query: 515 tcaagagaggttatcagccaaacactatcatcttgaatacacttatgaaaggtctctgtc 574
|||||| ||||||||||| |||||| ||| ||| | ||||||||| ||||| |||||||
Sbjct: 392 tcaagaagggttatcagcccaacactgtcaccttcactacacttatcaaaggcctctgtc 451
Query: 575 ttaaaggcatggttcaaagagccatggaatttcatgatgatgtggttgcacagggatttc 634
|||| || ||||| ||||| || ||||||||||| |||| || |||||||| ||||
Sbjct: 452 ttaatggtcacgttcagagagcactgcaatttcatgatcatgtcgtggcacaggggtttc 511
Query: 635 ggttggatgaagttagttacgcgacgttgatcaatgggttatgcaaaacgggagacacaa 694
|||||| |||||||||||| ||| ||||| || || ||||| || | |||| | ||||
Sbjct: 512 acttggatcaagttagttacgggaccttgattaacggattatgtaagatgggaaaaacaa 571
Query: 695 gagcggcgctgcggttactgagacagattgaagg------------gcctaatgtgataa 742
|||| | ||| ||| ||| || | |||||||| |||||||||| |||
Sbjct: 572 gagcttcattgcagttgctgcgaaatattgaagggaaattggtaaagcctaatgtggtaa 631
Query: 743 tgtacagcacaatcattgatagtttgtgtaaagttaaacttgtaagtgatgcatatgact 802
|||||| ||| ||||||||||| ||||| |||| ||||||||| |||||||| | | | |
Sbjct: 632 tgtacaacactatcattgatagcttgtgcaaagataaacttgttagtgatgcgtttaatt 691
Query: 803 tatattctgaaatggttgc 821
|||||||||||||||||||
Sbjct: 692 tatattctgaaatggttgc 710
>gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 802
Score = 242 bits (122), Expect = 3e-63
Identities = 319/384 (83%), Gaps = 3/384 (0%)
Strand = Plus / Plus
Query: 291 cttcaatcgcttgctccaaatgcatcctaccccttccatcatcgaatttagtatgatttt 350
|||||| ||| ||||||||||||| ||||||||||||||||||||||| | | ||||||
Sbjct: 98 cttcaaccgcatgctccaaatgcaacctaccccttccatcatcgaattcaacaagatttt 157
Query: 351 aacttccctactgaagat---gaagcattactccactgccatatccctttctcaccaaat 407
|||||| || | |||| |||||||||| |||| ||||| || ||||||||||||||
Sbjct: 158 aacttctcttgttaagaccaagaagcattaccccaccgccatttcactttctcaccaaat 217
Query: 408 ggaacttaagggaattaggcctgacattgtcacttccagcatcttgatcaattgttactg 467
|||||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 218 ggaacttaagggaattgcgccaaacattgttactctcagcatcttgatcaattgttactg 277
Query: 468 ccacttaggtcaacttacttcagctttttctgtaatgggaaacattctcaagagaggtta 527
| | |||||| | | || || || ||||||||| ||| |||||||||||||||||||
Sbjct: 278 caatctaggtcgaatcacctctgcattttctgtattggccaacattctcaagagaggttt 337
Query: 528 tcagccaaacactatcatcttgaatacacttatgaaaggtctctgtcttaaaggcatggt 587
|||||| | || |||| ||| | ||| ||||| ||||||||||||||| |||| |||
Sbjct: 338 tcagcctgataccatcaccttcactactcttatcaaaggtctctgtcttcgcggcaaggt 397
Query: 588 tcaaagagccatggaatttcatgatgatgtggttgcacagggatttcggttggatgaagt 647
||| ||||| | |||||||||| |||||| | ||||||||||||||||||||| ||||
Sbjct: 398 tcagcgagccctccaatttcatgacgatgtgatagcacagggatttcggttggatcaagt 457
Query: 648 tagttacgcgacgttgatcaatgg 671
||||||| || |||||||||||
Sbjct: 458 cagttacggaaccttgatcaatgg 481
>gnl|LJGI|TC62388 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 833
Score = 167 bits (84), Expect = 1e-40
Identities = 153/176 (86%)
Strand = Plus / Plus
Query: 326 ccatcatcgaatttagtatgattttaacttccctactgaagatgaagcattactccactg 385
||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 482 ccatcatcgaattcaacaagattttaacttccctcgtgaagatgaagcattactccactg 541
Query: 386 ccatatccctttctcaccaaatggaacttaagggaattaggcctgacattgtcacttcca 445
||||||||||||||| |||||| |||| ||||| |||| |||| || ||||||||||||
Sbjct: 542 tcatatccctttctcatcaaatgcaactcaaggggattatgcctaactttgtcacttcca 601
Query: 446 gcatcttgatcaattgttactgccacttaggtcaacttacttcagctttttctgta 501
|||||||||| ||||||||||||| |||||||| | | || ||||||||||||
Sbjct: 602 acatcttgatcgattgttactgccatctaggtcaaatcaatttcgctttttctgta 657
>gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 760
Score = 151 bits (76), Expect = 8e-36
Identities = 196/236 (83%)
Strand = Plus / Plus
Query: 447 catcttgatcaattgttactgccacttaggtcaacttacttcagctttttctgtaatggg 506
||||||||||||||| ||||||||| |||||||| | | ||| |||||||||||| | |
Sbjct: 310 catcttgatcaattgctactgccacctaggtcaaatcaattctgctttttctgtactcgc 369
Query: 507 aaacattctcaagagaggttatcagccaaacactatcatcttgaatacacttatgaaagg 566
| ||||||||||| ||||||||||| | || |||| ||| | ||| ||||| |||||
Sbjct: 370 cagaattctcaagagtggttatcagcctgataccatcaccttcactactcttatcaaagg 429
Query: 567 tctctgtcttaaaggcatggttcaaagagccatggaatttcatgatgatgtggttgcaca 626
||||||||||| |||| |||||| ||||| | |||||||||| |||||| | |||||
Sbjct: 430 tctctgtcttagtggcaaggttcagcgagccctccaatttcatgacgatgtgatagcaca 489
Query: 627 gggatttcggttggatgaagttagttacgcgacgttgatcaatgggttatgcaaaa 682
|||||||||||||||| |||| ||||||| || |||||||||||| |||| ||||
Sbjct: 490 gggatttcggttggatcaagtcagttacggaaccttgatcaatgggctatgtaaaa 545
>gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 785
Score = 83.8 bits (42), Expect = 2e-15
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 448 atcttgatcaattgttactgccacttaggtcaacttacttcagctttttctgtaatggga 507
|||||||||||||||| |||| || | |||||| | ||| || || |||||| ||||
Sbjct: 353 atcttgatcaattgtttctgcaacatgggtcaaatccctttcgccttctctgtattgggc 412
Query: 508 aacattctcaagagaggttatcagccaaacactatcatcttgaatacacttatgaaaggt 567
|| ||||||||||| |||||||||||| | ||| | | ||||| |||||| |||||||||
Sbjct: 413 aagattctcaagaggggttatcagccagatactgtaaccttgactacactcatgaaaggt 472
Query: 568 ctctgtctta 577
||||||||||
Sbjct: 473 ctctgtctta 482
>gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 537
Score = 83.8 bits (42), Expect = 2e-15
Identities = 149/187 (79%), Gaps = 12/187 (6%)
Strand = Plus / Plus
Query: 644 aagttagttacgcgacgttgatcaatgggttatgcaaaacgggagacacaagagcggcgc 703
|||| ||||| | ||| |||||||||||||| || |||| ||| || |||||||| || |
Sbjct: 71 aagtcagttatgggaccttgatcaatgggttgtgtaaaatgggtgaaacaagagctgccc 130
Query: 704 tgcggttactgagacagattgaaggg------------cctaatgtgataatgtacagca 751
|||| || |||||||||||||||||| ||| ||||| | ||||||||||
Sbjct: 131 tgcgattgctgagacagattgaagggaaattagttcagcctgatgtggtcatgtacagca 190
Query: 752 caatcattgatagtttgtgtaaagttaaacttgtaagtgatgcatatgacttatattctg 811
||||||||||||| | || |||| |||||||||||||||||| | || |||||||| |
Sbjct: 191 caatcattgatagcctctgcaaagataaacttgtaagtgatgcctgcgatttatattcgg 250
Query: 812 aaatggt 818
|||||||
Sbjct: 251 aaatggt 257