Miyakogusa Predicted Gene
- Lj2g3v0521160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0521160.1 tr|F0SFV6|F0SFV6_PLABD Class I peptide chain
release factor OS=Planctomyces brasiliensis (strain
ATC,36.47,1e-18,PEPTIDYL-TRNA HYDROLASE DOMAIN PROTEIN,NULL; PEPTIDE
CHAIN RELEASE FACTOR,NULL; RF-1,Peptide chain r,CUFF.34649.1
(954 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80295 similar to UniRef100_A7Q7P5 Cluster: Chromosome... 1102 0.0
>gnl|LJGI|TC80295 similar to UniRef100_A7Q7P5 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 773
Score = 1102 bits (556), Expect = 0.0
Identities = 556/556 (100%)
Strand = Plus / Plus
Query: 397 gtcaccgccgccgccatggatggttcagcaagaggatacctggaactaaccgacgacgag 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gtcaccgccgccgccatggatggttcagcaagaggatacctggaactaaccgacgacgag 277
Query: 457 ctgatgcggcagtgcgagatgggcaccttcaagtcctccggtcccggcggccagcaccgc 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctgatgcggcagtgcgagatgggcaccttcaagtcctccggtcccggcggccagcaccgc 337
Query: 517 aacaaacgagaatcctcggttcgcattaagcacttacccaccggcgtcattgctcaggct 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aacaaacgagaatcctcggttcgcattaagcacttacccaccggcgtcattgctcaggct 397
Query: 577 tctgaggatcgttcccagcataagaaccgtgcttctgcgctgagccgccttcgctctctc 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tctgaggatcgttcccagcataagaaccgtgcttctgcgctgagccgccttcgctctctc 457
Query: 637 atagctctcaaagtcaggaaaacggtggatcttgatgcttactcaccacctcgagagctt 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atagctctcaaagtcaggaaaacggtggatcttgatgcttactcaccacctcgagagctt 517
Query: 697 cttcagatacttcctcccaagtcatccattagagggtcggatattggttcacaaattgga 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cttcagatacttcctcccaagtcatccattagagggtcggatattggttcacaaattgga 577
Query: 757 cctaataactcaaaatttgcaatgggaatgcaagctcttttggatctcatttttgcagtt 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cctaataactcaaaatttgcaatgggaatgcaagctcttttggatctcatttttgcagtt 637
Query: 817 gagggatcaatctcggaagctgcaaaatatcttgggttatctactggggcactgtctcgg 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gagggatcaatctcggaagctgcaaaatatcttgggttatctactggggcactgtctcgg 697
Query: 877 ttaatcctatctgatgattcacttagaatggaagtaaatagtctgcgggcatcaaagggt 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ttaatcctatctgatgattcacttagaatggaagtaaatagtctgcgggcatcaaagggt 757
Query: 937 atgaagccactcaagt 952
||||||||||||||||
Sbjct: 758 atgaagccactcaagt 773
Score = 329 bits (166), Expect = 2e-89
Identities = 166/166 (100%)
Strand = Plus / Plus
Query: 58 ccagacgaagaggcaacaaacaatgatggcacacaaaatcctctgcaaaccaagcttctt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccagacgaagaggcaacaaacaatgatggcacacaaaatcctctgcaaaccaagcttctt 60
Query: 118 catcactctcagactcagcggaatcaccagctatggttcttcacaccacattcaccatcc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catcactctcagactcagcggaatcaccagctatggttcttcacaccacattcaccatcc 120
Query: 178 atttttcaactcaccaccctcttcctctctcaacaacactcgccct 223
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttttcaactcaccaccctcttcctctctcaacaacactcgccct 166