Miyakogusa Predicted Gene
- Lj2g3v0520120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0520120.1 Non Chatacterized Hit- tr|K4AX26|K4AX26_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,28.95,2e-18,coiled-coil,NULL; DUF3444,Domain of unknown
function DUF3444; DnaJ,Heat shock protein DnaJ, N-termin,CUFF.34650.1
(2201 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS319646 similar to UniRef100_A7QP45 Cluster: Chromosom... 1511 0.0
gnl|LJGI|TC75080 similar to UniRef100_A7QP45 Cluster: Chromosome... 1136 0.0
gnl|LJGI|TC62894 similar to UniRef100_A7QTV7 Cluster: Chromosome... 96 1e-18
gnl|LJGI|FS329780 similar to UniRef100_A7QTV7 Cluster: Chromosom... 80 7e-14
gnl|LJGI|AV409803 similar to UniRef100_A7QP45 Cluster: Chromosom... 72 2e-11
gnl|LJGI|TC80219 similar to UniRef100_A7QTV7 Cluster: Chromosome... 72 2e-11
>gnl|LJGI|FS319646 similar to UniRef100_A7QP45 Cluster: Chromosome chr1 scaffold_136,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_136, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 789
Score = 1511 bits (762), Expect = 0.0
Identities = 778/786 (98%)
Strand = Plus / Plus
Query: 990 catggaggaaccagttaatcaaatgggtagaaaaggtagttttggatataatggggatgt 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 catggaggaaccagttaatcaaatgggtagaaaaggtagttttggatataatggggatgt 63
Query: 1050 ctccctgattgaacttcagaatctgctgatggagaaagctagaaaagaaattagcaagaa 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ctccctgattgaacttcagaatctgctgatggagaaagctagaaaagaaattagcaagaa 123
Query: 1110 actcaaggaaactcagtcaaatactgttaataaatcggtggtgaaagagagtggaaattg 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 actcaaggaaactcagtcaaatactgttaataaatcggtggtgaaagagagtggaaattg 183
Query: 1170 cttccagaaagctaatgagaacagagaaaaatctgtaagaaattttgagacgtgtgctca 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cttccagaaagctaatgagaacagagaaaaatctgtaagaaattttgagacgtgtgctca 243
Query: 1230 aaataacattggaaagtcagaagatagacagagtggattgctagtagaaatcagtacaaa 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aaataacattggaaagtcagaagatagacagagtggattgctagtagaaatcagtacaaa 303
Query: 1290 ctttttggatgcaatgctagtagatgttccagatcctgatttccatgatttttacaagga 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctttttggatgcaatgctagtagatgttccagatcctgatttccatgatttttacaagga 363
Query: 1350 tcgaactgaaagatcttttggtgaaaatcaaaatcaaatatgggctgcttatgatcatga 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcgaactgaaagatcttttggtgaaaatcaaaatcaaatatgggctgcttatgatcatga 423
Query: 1410 tgatgggatgcctcgatgttatgcaatggtccacaacgtgatctctttgaatccattcaa 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgatgggatgcctcgatgttatgcaatggtccacaacgtgatctctttgaatccattcaa 483
Query: 1470 gatacagatcagtctgctcaatccaaataccaacagtgaactgggctctctaaattgggt 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gatacagatcagtctgctcaatccaaataccaacagtgaactgggctctctaaattgggt 543
Query: 1530 tgcttcaggcttttcaaaaacttgtggggatttcagaataggtagacatgaaatctgtaa 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgcttcaggcttttcaaaaacttgtggggatttcagaataggtagacatgaaatctgtaa 603
Query: 1590 ctcgatacannnnnnnnctcacaaggttaggtggagagaaggtaatgacggagccattcg 1649
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctcgatacattttttttctcacaaggttaggtggagagaaggtaatgacggagccattcg 663
Query: 1650 tatatatcccagaaaaggggatatttgggccatctataggaactggtctcctgactggaa 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tatatatcccagaaaaggggatatttgggccatctataggaactggtctcctgactggaa 723
Query: 1710 tgagctaacagcagatgaggttatgcacaagttcgatgttgttgaagtacttgaggattt 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tgagctaacagcagatgaggttatgcacaagttcgatgttgttgaagtacttgaggattt 783
Query: 1770 tagcga 1775
||||||
Sbjct: 784 tagcga 789
>gnl|LJGI|TC75080 similar to UniRef100_A7QP45 Cluster: Chromosome chr1 scaffold_136,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_136, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 1046
Score = 1136 bits (573), Expect = 0.0
Identities = 580/581 (99%), Gaps = 1/581 (0%)
Strand = Plus / Plus
Query: 1621 tggagagaaggtaatgacggagccattcgtatatatcccagaaaaggggatatttgggcc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tggagagaaggtaatgacggagccattcgtatatatcccagaaaaggggatatttgggcc 303
Query: 1681 atctataggaactggtctcctgactggaatgagctaacagcagatgaggttatgcacaag 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atctataggaactggtctcctgactggaatgagctaacagcagatgaggttatgcacaag 363
Query: 1741 ttcgatgttgttgaagtacttgaggattttagcgaagaacatggtgttactattattcct 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttcgatgttgttgaagtacttgaggattttagcgaagaacatggtgttactattattcct 423
Query: 1801 ctggtcaaggtggctgggttcaagacagtatttcaccaccacatagatccaagagaaatc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctggtcaaggtggctgggttcaagacagtatttcaccaccacatagatccaagagaaatc 483
Query: 1861 agagttattccaagggaagagatgcttcggttctctcatcaggtaccttcatgcttgctt 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agagttattccaagggaagagatgcttcggttctctcatcaggtaccttcatgcttgctt 543
Query: 1921 actggtctagaagctcagaatgctccaaagggttgcagagtgctggacccagctgctact 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 actggtctagaagctcagaatgctccaaagggttgcagagtgctggacccagctgctact 603
Query: 1981 ccgtttgaacttcatcaggtaatagaagttgtggaggaggaatacatggtggacaatggg 2040
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ccgtttgaacttcatca-gtaatagaagttgtggaggaggaatacatggtggacaatggg 662
Query: 2041 gatggtgttatgaaagaaacatgtgataaaaacaaagaagccagttgtgagcaattgatc 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gatggtgttatgaaagaaacatgtgataaaaacaaagaagccagttgtgagcaattgatc 722
Query: 2101 agtgatgtgggaaaacatggggaaggaaaggagggaaagagtaaagatatccaggaaata 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 agtgatgtgggaaaacatggggaaggaaaggagggaaagagtaaagatatccaggaaata 782
Query: 2161 gaaatattgaaagagcaaggagggtgtttagcatgttaatg 2201
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gaaatattgaaagagcaaggagggtgtttagcatgttaatg 823
>gnl|LJGI|TC62894 similar to UniRef100_A7QTV7 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (18%)
Length = 783
Score = 95.6 bits (48), Expect = 1e-18
Identities = 159/196 (81%)
Strand = Plus / Plus
Query: 161 atatttctgccgagaacaaaataaatggagaaacagattggtatggtatacttggtgcaa 220
|||| ||||| ||||||||| ||| |||||||| |||||||||||||||||||| | ||
Sbjct: 454 atatctctgctgagaacaaagtaagtggagaaatggattggtatggtatacttggagtaa 513
Query: 221 acccctatgccgatgatgatacagtcaggaaacactacaggaagctagctctcatgcttc 280
|||| ||| ||||| || || || || || || ||||||||||| ||||||| ||||
Sbjct: 514 gtccctttgctgatgaggagactgttagaaagcagtacaggaagctggctctcacccttc 573
Query: 281 accctgacaagaacaaatctgttggggctgatggggcatttaaacttatatccgaggcat 340
|||||||||| ||||| | | | || || || || |||||||| ||| | || |||||||
Sbjct: 574 accctgacaaaaacaagtgtttaggtgcagagggtgcatttaagcttgtttcagaggcat 633
Query: 341 ggagtttactttcaga 356
||||||| || |||||
Sbjct: 634 ggagtttgctatcaga 649
>gnl|LJGI|FS329780 similar to UniRef100_A7QTV7 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 696
Score = 79.8 bits (40), Expect = 7e-14
Identities = 112/136 (82%)
Strand = Plus / Plus
Query: 161 atatttctgccgagaacaaaataaatggagaaacagattggtatggtatacttggtgcaa 220
|||| ||||| ||||||| | ||| |||||||| |||||||||||||||||||| | ||
Sbjct: 525 atatctctgctgagaacagagtaagtggagaaatggattggtatggtatacttggagtaa 584
Query: 221 acccctatgccgatgatgatacagtcaggaaacactacaggaagctagctctcatgcttc 280
|||| ||| ||||| || || || || || || ||||||||||| ||||||| ||||
Sbjct: 585 gtccctttgctgatgaggagactgttagaaagcagtacaggaagctggctctcacccttc 644
Query: 281 accctgacaagaacaa 296
|||||||||| |||||
Sbjct: 645 accctgacaaaaacaa 660
>gnl|LJGI|AV409803 similar to UniRef100_A7QP45 Cluster: Chromosome chr1 scaffold_136,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_136, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 400
Score = 71.9 bits (36), Expect = 2e-11
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 76 ggtgcaaaaaagtttgctttgaaagctcaaaatttatttcctgcccttgagggtattcct 135
|||||||||||||||||| | || |||| |||||| | |||||| || |||||| ||||
Sbjct: 223 ggtgcaaaaaagtttgctctcaaggctctaaatttgtatcctgcactggagggtgttccc 282
Query: 136 cagctgatagcaacacttgatgtatatatttctgccgagaacaaaataaatggagaaaca 195
||| | | ||| || |||| ||||| ||||| ||||| |||||||||||| |||
Sbjct: 283 cagtttctgtcaattctgaatgtttatatctctgctgagaataaaataaatggacaaatg 342
Query: 196 gattggtatggtatacttgg 215
||||||||||||||||||||
Sbjct: 343 gattggtatggtatacttgg 362
>gnl|LJGI|TC80219 similar to UniRef100_A7QTV7 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(29%)
Length = 1122
Score = 71.9 bits (36), Expect = 2e-11
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 1891 ttctctcatcaggtaccttcatgcttgcttactggtctagaagctcagaatgctccaaag 1950
|||||||||||||| ||| |||||||||||||| | |||||||| ||||||||||||
Sbjct: 632 ttctctcatcaggttcctaattgcttgcttactggccatgaagctcataatgctccaaag 691
Query: 1951 ggttgcagagtgctggacccagctgctactcc 1982
||||| ||| | |||| ||||| ||||||||
Sbjct: 692 ggttgtcgagagttggatccagcagctactcc 723
Score = 63.9 bits (32), Expect = 4e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 1390 tgggctgcttatgatcatgatgatgggatgcctcgatgttatgc 1433
||||||||||||||| |||||||||| |||||||||| ||||||
Sbjct: 131 tgggctgcttatgatgatgatgatggaatgcctcgatattatgc 174