Miyakogusa Predicted Gene

Lj2g3v0510100.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0510100.1 tr|Q0JA54|Q0JA54_ORYSJ Os04g0615500 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os04g06155,34.82,0.000000000003,APO1 (ACCUMULATION OF PHOTOSYSTEM
ONE 1),NULL; EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1,NULL;
A,CUFF.34647.1
         (1326 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AW163946 similar to UniRef100_A7PK14 Cluster: Chromosom...   642   0.0  

>gnl|LJGI|AW163946 similar to UniRef100_A7PK14 Cluster: Chromosome chr15 scaffold_19,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr15 scaffold_19, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (26%)
          Length = 446

 Score =  642 bits (324), Expect = 0.0
 Identities = 324/324 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1003 ggttattgctcggaagttcacgtcggaccatggggccacaacgctaagctttgtggagca 1062
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggttattgctcggaagttcacgtcggaccatggggccacaacgctaagctttgtggagca 60

                                                                        
Query: 1063 ttcaagcaccagtggcgggatgggaagcacggttggcaggacgcgactgtggatgaagtt 1122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttcaagcaccagtggcgggatgggaagcacggttggcaggacgcgactgtggatgaagtt 120

                                                                        
Query: 1123 tttcctccaaattatgtgtggcatgttagggacccgagtggacctcccttgaggagttca 1182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tttcctccaaattatgtgtggcatgttagggacccgagtggacctcccttgaggagttca 180

                                                                        
Query: 1183 ctgaagagatattatggtaagactccagctgtggtagaagtgtgcatgcaagctggtgcg 1242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ctgaagagatattatggtaagactccagctgtggtagaagtgtgcatgcaagctggtgcg 240

                                                                        
Query: 1243 aagatctctgatgagtacaagcccatgatgaggcttgacattgtaatcccggatagtgat 1302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  aagatctctgatgagtacaagcccatgatgaggcttgacattgtaatcccggatagtgat 300

                                    
Query: 1303 gagacaagaatgattatttgatga 1326
            ||||||||||||||||||||||||
Sbjct: 301  gagacaagaatgattatttgatga 324