Miyakogusa Predicted Gene
- Lj2g3v0499030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0499030.1 Non Chatacterized Hit- tr|K4CIN5|K4CIN5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,33.19,1e-17,DUF1442,Protein of unknown function DUF1442; no
description,NULL; seg,NULL,CUFF.34639.1
(678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82285 similar to UniRef100_A7QGS0 Cluster: Chromosome... 1279 0.0
gnl|LJGI|TC71376 similar to UniRef100_A7QGS0 Cluster: Chromosome... 260 1e-68
>gnl|LJGI|TC82285 similar to UniRef100_A7QGS0 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (82%)
Length = 868
Score = 1279 bits (645), Expect = 0.0
Identities = 668/678 (98%)
Strand = Plus / Plus
Query: 1 atggcttgctggtctgcagaaaatgccacaaaggcctatctaagcactttgaaaatgggt 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 63 atggcttgctggtctgcagaaaatgccacagaggcctatctaagcactttgaaaatgggt 122
Query: 61 caaaatgcaaaagaaccagatgttgcagagtttatatcagcactagcagctggaaacaat 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 123 caaaatgcaaaagaaccagatgttgcagagtttatatcagtactagcagctggaaacaat 182
Query: 121 gcacaactcatggttgtggcttgtgctggtgcagcagattccaccacactagctttgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcacaactcatggttgtggcttgtgctggtgcagcagattccaccacactagctttgata 242
Query: 181 gctgctgctcatcaaactggtggcaatgttgtttgtattgtcaaaagccatgaagatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gctgctgctcatcaaactggtggcaatgttgtttgtattgtcaaaagccatgaagatctc 302
Query: 241 aaagcctcnnnnnnnttcctgagactaggtgctagccaagtgcaattcatggttggagaa 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaagcctcaaaaaaattcctgagactaggtgctagccaagtgcaattcatggttggagaa 362
Query: 301 gctcaagaattgcttttaaaccaagcagattttgtgctaattgattgtaaccttgtgaac 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 363 gctcaagaattgcttttaaaccaagcggattttgtgctaattgattgtaaccttgtgaac 422
Query: 361 catgaagaaattgtcaaagcaataatccaaggtggtggtggtggaaggaaaaatggcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 catgaagaaattgtcaaagcaataatccaaggtggtggtggtggaaggaaaaatggcaca 482
Query: 421 gtggttgttggttacactgcatttgggtgcagaggttcctggtggtcatgtgagtcaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtggttgttggttacactgcatttgggtgcagaggttcctggtggtcatgtgagtcaaaa 542
Query: 481 actcagttgcttccaataggagaagggcttcttgtgacaagatttggaggggcagaagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 actcagttgcttccaataggagaagggcttcttgtgacaagatttggaggggcagaagta 602
Query: 541 tcaactactagtacaaaatatggatctaaaatgagtaagaacaggagtagatgggttgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tcaactactagtacaaaatatggatctaaaatgagtaagaacaggagtagatgggttgtc 662
Query: 601 actgtggataaatgcactggtgaagaacatgtttacaggatcagacatccacaagggaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 actgtggataaatgcactggtgaagaacatgtttacaggatcagacatccacaagggaaa 722
Query: 661 gtgattcaagcttaatca 678
||||||||||||||||||
Sbjct: 723 gtgattcaagcttaatca 740
>gnl|LJGI|TC71376 similar to UniRef100_A7QGS0 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 563
Score = 260 bits (131), Expect = 1e-68
Identities = 185/203 (91%)
Strand = Plus / Plus
Query: 1 atggcttgctggtctgcagaaaatgccacaaaggcctatctaagcactttgaaaatgggt 60
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 82 atggcttgctggtctgcagaaaatgccacaaaggcctatctcaacactttgaaaatgggt 141
Query: 61 caaaatgcaaaagaaccagatgttgcagagtttatatcagcactagcagctggaaacaat 120
||||| |||||||| ||| |||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 142 caaaaggcaaaagagccaaatgtagctgagttcatatcagcactagctgctggaaacaat 201
Query: 121 gcacaactcatggttgtggcttgtgctggtgcagcagattccaccacactagctttgata 180
|||||||| ||||||||||| |||||| ||||||||| |||| ||||||||| ||| |
Sbjct: 202 gcacaacttatggttgtggcatgtgcttctgcagcagactccaacacactagccttggtt 261
Query: 181 gctgctgctcatcaaactggtgg 203
|||||||||||||||||||||||
Sbjct: 262 gctgctgctcatcaaactggtgg 284
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 408 gaaaaatggcacagtggttgttggttacactgcatttgggtgcagaggttcctggtggtc 467
||||||||||||||||||||| || |||| ||||||| | |||||||| || |||| |||
Sbjct: 495 gaaaaatggcacagtggttgtgggatacaatgcatttagctgcagaggatcttggttgtc 554
Query: 468 at 469
||
Sbjct: 555 at 556