Miyakogusa Predicted Gene
- Lj2g3v0486960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0486960.1 Non Chatacterized Hit- tr|C0PJ22|C0PJ22_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,64.29,0.0000000000005,Clp_N,Clp, N-terminal; no
description,Double Clp-N motif; Double Clp-N motif,NULL; seg,NULL;
SUBFAMI,CUFF.34634.1
(774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59853 similar to UniRef100_A7QGU0 Cluster: Chromosome... 1199 0.0
gnl|LJGI|TC57349 similar to UniRef100_A7QGU0 Cluster: Chromosome... 84 1e-15
>gnl|LJGI|TC59853 similar to UniRef100_A7QGU0 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 1181
Score = 1199 bits (605), Expect = 0.0
Identities = 605/605 (100%)
Strand = Plus / Plus
Query: 170 tcggaaccagaatcaccctccaccgccccgcctcctctcgttcccttcatctcaacacca 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tcggaaccagaatcaccctccaccgccccgcctcctctcgttcccttcatctcaacacca 208
Query: 230 attgccgcgcaacctcagcaacggtgtcgtttagcctccccaccccgaaacctcaaccgg 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 attgccgcgcaacctcagcaacggtgtcgtttagcctccccaccccgaaacctcaaccgg 268
Query: 290 atgcacctgagaaagttccaaagtggtcggcgaggtcgataaagtcgtttgcaatggggg 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atgcacctgagaaagttccaaagtggtcggcgaggtcgataaagtcgtttgcaatggggg 328
Query: 350 aattggaagcgaggaagctcaagtatcctaccacaggaactgaggcacttctcatgggga 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aattggaagcgaggaagctcaagtatcctaccacaggaactgaggcacttctcatgggga 388
Query: 410 ttttagttgaaggaacaagtaaagctgcaaaattcttaagagccaatggaattactcttt 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttttagttgaaggaacaagtaaagctgcaaaattcttaagagccaatggaattactcttt 448
Query: 470 tcaaagtacgtgatgaaacggtagagctacttgggaaatctgacatgtatttcttcagtc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcaaagtacgtgatgaaacggtagagctacttgggaaatctgacatgtatttcttcagtc 508
Query: 530 cagaacatcctcctttgactgaacccgctcggaaagcccttgattgggcaattgatgaga 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cagaacatcctcctttgactgaacccgctcggaaagcccttgattgggcaattgatgaga 568
Query: 590 aattaaagtcaggtggagaaggggaaataaacgtggctcatttacttctaggaatttggt 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aattaaagtcaggtggagaaggggaaataaacgtggctcatttacttctaggaatttggt 628
Query: 650 cacaaaaagaatcagcaggtcaacagatcttggccggtctaggtttcaatgatgaaaaag 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cacaaaaagaatcagcaggtcaacagatcttggccggtctaggtttcaatgatgaaaaag 688
Query: 710 ccaaagaacttgcaaaatcagttgatggagatattgacttgagttacaggagaacagcat 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ccaaagaacttgcaaaatcagttgatggagatattgacttgagttacaggagaacagcat 748
Query: 770 agaag 774
|||||
Sbjct: 749 agaag 753
Score = 113 bits (57), Expect = 2e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 25 cccattcatccaaacccacctcacaaaacctccctcttcactccaatggcttccatt 81
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cccattcatccaaacccacctcacaaaacctccctcttcactccaatggcttccatt 59
>gnl|LJGI|TC57349 similar to UniRef100_A7QGU0 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 1036
Score = 83.8 bits (42), Expect = 1e-15
Identities = 171/214 (79%)
Strand = Plus / Plus
Query: 328 ataaagtcgtttgcaatgggggaattggaagcgaggaagctcaagtatcctaccacagga 387
||||| ||||||||||||||||| ||||| || ||||| ||||||||||| || || ||
Sbjct: 280 ataaaatcgtttgcaatgggggagttggaggctaggaaactcaagtatccaactaccggc 339
Query: 388 actgaggcacttctcatggggattttagttgaaggaacaagtaaagctgcaaaattctta 447
||||| || |||||||||||| || | | || || || | | |||||| ||||||||
Sbjct: 340 actgaagcccttctcatgggggttcttatcgagggtactaatgtagctgctaaattcttg 399
Query: 448 agagccaatggaattactcttttcaaagtacgtgatgaaacggtagagctacttgggaaa 507
| ||||||||| |||| ||||| || || || |||||||| || || ||||||| |||
Sbjct: 400 cgtgccaatggagttacactttttaaggtgcgagatgaaaccgtgaagttacttggaaaa 459
Query: 508 tctgacatgtatttcttcagtccagaacatcctc 541
|||| |||| ||||||||| || || |||||||
Sbjct: 460 gctgatatgtttttcttcagccctgagcatcctc 493