Miyakogusa Predicted Gene
- Lj2g3v0450440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0450440.1 Non Chatacterized Hit- tr|B7FI27|B7FI27_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,87.72,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
PER1-RELATED,Per1-like; Per1,Per1-like,CUFF.34598.1
(1029 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72507 similar to UniRef100_Q2V9B6 Cluster: Per1-like ... 946 0.0
gnl|LJGI|BG662120 similar to UniRef100_A7PWQ8 Cluster: Chromosom... 466 e-130
gnl|LJGI|TC63601 similar to UniRef100_A7PWQ8 Cluster: Chromosome... 100 3e-20
gnl|LJGI|FS355954 similar to UniRef100_A7PWQ8 Cluster: Chromosom... 58 1e-07
>gnl|LJGI|TC72507 similar to UniRef100_Q2V9B6 Cluster: Per1-like family protein; n=1;
Solanum tuberosum|Rep: Per1-like family protein -
Solanum tuberosum (Potato), partial (52%)
Length = 813
Score = 946 bits (477), Expect = 0.0
Identities = 480/481 (99%)
Strand = Plus / Plus
Query: 61 accgccagcgacggcgacgccgatccgctttacaaagcttgtgtggaacagtgcgagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 accgccagcgacggcgacgccgatccgctttacaaagcttgtgtggaacagtgcgagaaa 392
Query: 121 actggatgtgtaggggatagatgctttcaacattgtaaattctcatctgatggaaaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 actggatgtgtaggggatagatgctttcaacattgtaaattctcatctgatggaaaacca 452
Query: 181 gttgatggtccatggtatatgcatgaacccctctacttgaggtggaaacaatgggactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gttgatggtccatggtatatgcatgaacccctctacttgaggtggaaacaatgggactgt 512
Query: 241 cgcactgattgtcggtatcactgcatgctagtaagagaagaagaaagaacaaaacttggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cgcactgattgtcggtatcactgcatgctagtaagagaagaagaaagaacaaaacttggt 572
Query: 301 gacaagcctgtcaagtatcatggaaaatggccattccggcgtgtatatggcattcaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gacaagcctgtcaagtatcatggaaaatggccattccggcgtgtatatggcattcaggaa 632
Query: 361 cctgtggctgttgctttgtctgcccttaatctagctatgcagtttcatggctgggtatcc 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 633 cctgtggctgttgctttgtctgcccttaatctagccatgcagtttcatggctgggtatcc 692
Query: 421 tttttcattcttgtgtactacaagttgcctttgatgcctgataagaagacttactatgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tttttcattcttgtgtactacaagttgcctttgatgcctgataagaagacttactatgag 752
Query: 481 tacactggcctgtggcatatctatgggattctatctatgaattcatggttgtggagttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tacactggcctgtggcatatctatgggattctatctatgaattcatggttgtggagttct 812
Query: 541 g 541
|
Sbjct: 813 g 813
>gnl|LJGI|BG662120 similar to UniRef100_A7PWQ8 Cluster: Chromosome chr19 scaffold_35,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_35, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 431
Score = 466 bits (235), Expect = e-130
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 795 ggcaatttgggctggtgtttcgagtcatccggcacggtggaaattatggactgtggtggt 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaatttgggctggtgtttcgagtcatccggcacggtggaaattatggactgtggtggt 60
Query: 855 gggacaagccctagctatggtcatggagacatatgatttcccaccttacatgggatatgt 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggacaagccctagctatggtcatggagacatatgatttcccaccttacatgggatatgt 120
Query: 915 ggatgctcatgctgtttggaatgcttgttgcattcctcttacattcctttggtggagtta 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggatgctcatgctgtttggaatgcttgttgcattcctcttacattcctttggtggagtta 180
Query: 975 tatcagggatgatgctgagttcagaacctctgctctccttaagaaggtgaaatag 1029
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatcagggatgatgctgagttcagaacctctgctctccttaagaaggtgaaatag 235
>gnl|LJGI|TC63601 similar to UniRef100_A7PWQ8 Cluster: Chromosome chr19 scaffold_35,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_35, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1492
Score = 99.6 bits (50), Expect = 3e-20
Identities = 308/394 (78%)
Strand = Plus / Plus
Query: 307 cctgtcaagtatcatggaaaatggccattccggcgtgtatatggcattcaggaacctgtg 366
||||||||||||||||| |||||||||||| |||| | ||||| || ||||| |||
Sbjct: 500 cctgtcaagtatcatggtaaatggccattcgcgcgtatttatgggatgcaggaggctgct 559
Query: 367 gctgttgctttgtctgcccttaatctagctatgcagtttcatggctgggtatcctttttc 426
| || ||||| || || || ||||| || ||||| |||||||| ||||| |||||||||
Sbjct: 560 tccgtggctttctcagctctcaatcttgcaatgcattttcatggttgggtctcctttttc 619
Query: 427 attcttgtgtactacaagttgcctttgatgcctgataagaagacttactatgagtacact 486
|||||| ||||||| || || ||| | | || ||| || | || |||||||| ||
Sbjct: 620 attcttttgtactataaattacctctaaaagatggaaaggaggcatattatgagtatgct 679
Query: 487 ggcctgtggcatatctatgggattctatctatgaattcatggttgtggagttctgttttt 546
|| |||||||||| |||||| | ||||| | || || ||||| ||||| |||||||
Sbjct: 680 ggtttgtggcatatatatgggctcctatcactcaactcctggttctggagcgctgttttc 739
Query: 547 cacagtagagctgtggaattgacagagaagttgaattattcttctgctgtgggcttactt 606
|| ||||||| |||||| | ||||||| | | || |||||||||||| | |||
Sbjct: 740 catagtagagatgtggatctaacagagacactagactactcttctgctgtgattcttctt 799
Query: 607 ggattcaccctcattctagcaatactgcgagcttttaatgttagggatgaggctacaaga 666
|||| | |||||||| |||| || | ||| | || |||||||||||||||||||| |||
Sbjct: 800 ggatactccctcattttagccatcttacgatccttcaatgttagggatgaggctaccaga 859
Query: 667 gtcatggtttctgctcccttggttgcttttgtga 700
|| |||||||||||||| ||| ||||||||||||
Sbjct: 860 gttatggtttctgctccattgattgcttttgtga 893
>gnl|LJGI|FS355954 similar to UniRef100_A7PWQ8 Cluster: Chromosome chr19 scaffold_35,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_35, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 411
Score = 58.0 bits (29), Expect = 1e-07
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 656 aggctacaagagtcatggtttctgctcccttggttgcttttgtga 700
||||||| ||||| |||||||||||||| ||| ||||||||||||
Sbjct: 360 aggctaccagagttatggtttctgctccattgattgcttttgtga 316