Miyakogusa Predicted Gene
- Lj2g3v0435550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0435550.1 Non Chatacterized Hit- tr|I1LDU6|I1LDU6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.96,0,PP2,Phloem
protein 2-like; F-box domain,F-box domain, cyclin-like; FBOX,F-box
domain, cyclin-like; F,NODE_30892_length_1386_cov_39.839104.path1.1
(870 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV423946 weakly similar to UniRef100_A7QVJ9 Cluster: Ch... 494 e-139
gnl|LJGI|TC60027 weakly similar to UniRef100_A7PXZ7 Cluster: Chr... 432 e-120
gnl|LJGI|TC80503 weakly similar to UniRef100_A7QVJ9 Cluster: Chr... 387 e-107
gnl|LJGI|TC63267 similar to UniRef100_A7PXZ7 Cluster: Chromosome... 280 1e-74
gnl|LJGI|BP065374 UniRef100_A3HMU8 Cluster: Binding-protein-depe... 147 1e-34
>gnl|LJGI|AV423946 weakly similar to UniRef100_A7QVJ9 Cluster: Chromosome chr16
scaffold_189, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_189, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 411
Score = 494 bits (249), Expect = e-139
Identities = 263/270 (97%)
Strand = Plus / Plus
Query: 1 atgggggctgctatttcttcaactgcagtagnnnnnnntgatgaaggatctaattctaca 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 142 atgggggctgctatttcttcaactgcagtagaaaaaaatgatgaaggatctaattctaca 201
Query: 61 tcaccaaggtctggtcttggtgatatcccagagagctgcatctcctcactgttcatgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tcaccaaggtctggtcttggtgatatcccagagagctgcatctcctcactgttcatgaat 261
Query: 121 cttgacccaccagatatttgtaaattggccagagtaaacagagcttttcacagagcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cttgacccaccagatatttgtaaattggccagagtaaacagagcttttcacagagcttcc 321
Query: 181 tcagctgactttgtttgggaatcaaagttaccgccaagctacaagtttcttgccaataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcagctgactttgtttgggaatcaaagttaccgccaagctacaagtttcttgccaataaa 381
Query: 241 attcttggtgaagaaaatcttgcttccatg 270
||||||||||||||||||||||||||||||
Sbjct: 382 attcttggtgaagaaaatcttgcttccatg 411
>gnl|LJGI|TC60027 weakly similar to UniRef100_A7PXZ7 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (79%)
Length = 1247
Score = 432 bits (218), Expect = e-120
Identities = 617/746 (82%), Gaps = 3/746 (0%)
Strand = Plus / Plus
Query: 71 ctggtcttggtgatatcccagagagctgcatctcctcactgttcatgaatcttgacccac 130
||||||||| |||| | ||||| | ||||||||| || ||| | |||| |||||| ||||
Sbjct: 192 ctggtcttgatgatgtgccagaaaactgcatctcttccctgctgatgagtcttgatccac 251
Query: 131 cagatatttgtaaattggccagagtaaacagagcttttcacagagcttcctcagctgact 190
||| |||||||| ||||||||||| |||| ||||||||| ||||||||||| |||||||
Sbjct: 252 aagagatttgtaagttggccagagtcaacaaagcttttcatagagcttcctctgctgact 311
Query: 191 ttgtttgggaatcaaagttaccgccaagctacaagtttcttgccaataaaattcttggtg 250
|| |||||||||||||||| || ||| ||||||| ||||||| |||||| || | || |
Sbjct: 312 ttctttgggaatcaaagttgcccccaggctacaaatttcttgttaataaagttttggggg 371
Query: 251 aagaaaatcttgcttccatgactaagaaagagatttacacaaaactgtgtcagcccaatc 310
||||||| |||| ||||||||| ||||||||||| || | ||||| || || ||||||
Sbjct: 372 aagaaaaacttggttccatgaccaagaaagagatctatgccaaactatgccaacccaatt 431
Query: 311 gctttgatggtgataacaaagaggtttggctggacaaatgcagtggacaggtttgtttgt 370
|||||| |||| | |||||| |||||||||||| |||||||| ||| |||||||||
Sbjct: 432 tctttgacggtggtgccaaagaaatttggctggacagatgcagtgcacaagtttgtttgc 491
Query: 371 tcatgtcatcaaagtccttgaagataacaggaatagatgatagaagatactggaactaca 430
|||| ||| ||| ||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 492 tcatttcaccaaggtctttgaagataacaggaatagatgatagaagatactggaattata 551
Query: 431 ttccaactgaggaatccaggtttaagaacgttgcctatcttcaacaaatgtggtgggttg 490
|||| ||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||
Sbjct: 552 ttccgactgaggaatcaaggttcaagagtgttgcatatcttcaacaaatgtggtgggttg 611
Query: 491 aagtggtaggggagctagagtttgtatttcctgtggggagttacagcataattttcagac 550
|||| ||||||||||||| |||| |||||| |||| || |||||| |||||| |
Sbjct: 612 aagtactaggggagctagattttgaatttcccaaagggaactatagcatatatttcaggc 671
Query: 551 tccaattgggcaaggcttccaaaagattgggccggcgcgtctgcaacgttgatcaagtgc 610
|||||||||| || |||| || |||||||| |||||||| |||||| |||| || || |
Sbjct: 672 tccaattggggaaaacttctaagagattggggcggcgcgtgtgcaaccttga-caggttc 730
Query: 611 atggctgggatcttaagcccgtccgattccaactctccacatccgacggccagcgttcac 670
|||||||||| | |||||||| |||| || || || ||||||||||||||| |||||
Sbjct: 731 atggctgggacatcaagcccgttagatttcagctatctacatccgacggccagagttcat 790
Query: 671 tctcagaatgttacttgagcgggccaggagagtgggcttactaccatgttgg-gaatttc 729
| || | | ||| ||| | ||||| ||||| ||||||| |||||||||||| || |||
Sbjct: 791 tgtcccagtcttatttgcgtgggcctggagaatgggctttctaccatgttggagactttg 850
Query: 730 atagttgaacagcccaatgagcccatcaaagtcaagttttctctggcccaaattgattgc 789
| |||| |||||||| | ||| || ||||||||||| |||| ||||||||||||
Sbjct: 851 cca-ttgagaggcccaatgtgtccacaaacatcaagttttctttggctcaaattgattgc 909
Query: 790 actcataccaaaggtggcctctgcat 815
||||| ||||||||||| ||||||||
Sbjct: 910 actcacaccaaaggtggtctctgcat 935
>gnl|LJGI|TC80503 weakly similar to UniRef100_A7QVJ9 Cluster: Chromosome chr16
scaffold_189, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_189, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 514
Score = 387 bits (195), Expect = e-107
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 676 gaatgttacttgagcgggccaggagagtgggcttactaccatgttgggaatttcatagtt 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatgttacttgagcgggccaggagagtgggcttactaccatgttgggaatttcatagtt 60
Query: 736 gaacagcccaatgagcccatcaaagtcaagttttctctggcccaaattgattgcactcat 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacagcccaatgagcccatcaaagtcaagttttctctggcccaaattgattgcactcat 120
Query: 796 accaaaggtggcctctgcatagatagtgccatcatttgcccaactgactttagagaaaga 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accaaaggtggcctctgcatagatagtgccatcatttgcccaactgactttagagaaaga 180
Query: 856 ctcaaacatctttaa 870
|||||||||||||||
Sbjct: 181 ctcaaacatctttaa 195
>gnl|LJGI|TC63267 similar to UniRef100_A7PXZ7 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 694
Score = 280 bits (141), Expect = 1e-74
Identities = 321/381 (84%)
Strand = Plus / Plus
Query: 71 ctggtcttggtgatatcccagagagctgcatctcctcactgttcatgaatcttgacccac 130
||||||||| |||| | ||||| | | ||||||| || ||| | |||| |||||| ||||
Sbjct: 191 ctggtcttgatgatgtgccagaaaaccgcatctcttccctgctgatgagtcttgatccac 250
Query: 131 cagatatttgtaaattggccagagtaaacagagcttttcacagagcttcctcagctgact 190
||| |||||||| ||||||||||| |||| ||||||||| ||||||||||| |||||||
Sbjct: 251 aagagatttgtaagttggccagagtcaacaaagcttttcatagagcttcctctgctgact 310
Query: 191 ttgtttgggaatcaaagttaccgccaagctacaagtttcttgccaataaaattcttggtg 250
|| |||||||||||||||| || ||| ||||||| ||||||| |||||| || | || |
Sbjct: 311 ttctttgggaatcaaagttgcccccaggctacaaatttcttgttaataaagttttggggg 370
Query: 251 aagaaaatcttgcttccatgactaagaaagagatttacacaaaactgtgtcagcccaatc 310
||||||| |||| ||||||||| ||||||||||| || | ||||| || || ||||||
Sbjct: 371 aagaaaaacttggttccatgaccaagaaagagatctatgccaaactatgccaacccaatt 430
Query: 311 gctttgatggtgataacaaagaggtttggctggacaaatgcagtggacaggtttgtttgt 370
|||||| |||| | |||||| |||||||||||| |||||||| ||| |||||||||
Sbjct: 431 tctttgacggtggtgccaaagaaatttggctggacagatgcagtgcacaagtttgtttgc 490
Query: 371 tcatgtcatcaaagtccttgaagataacaggaatagatgatagaagatactggaactaca 430
|||| ||| ||| ||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 491 tcatttcaccaaggtctttgaagataacaggaatagatgatagaagatactggaattata 550
Query: 431 ttccaactgaggaatccaggt 451
|||| ||||||||||| ||||
Sbjct: 551 ttccgactgaggaatcaaggt 571
>gnl|LJGI|BP065374 UniRef100_A3HMU8 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Pseudomonas,
partial (3%)
Length = 500
Score = 147 bits (74), Expect = 1e-34
Identities = 181/203 (89%), Gaps = 17/203 (8%)
Strand = Plus / Minus
Query: 675 agaatgttacttgagcgggccaggagagtgggcttactaccatgttgggaatttcatagt 734
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agaatgttacttgagcggnccaggagagtgggcttactaccatgttgggaatttcatagt 441
Query: 735 tgaacagccc-aatgagccca-tcaaagtc-aagttttct-ctg-gcccaaattgat--t 787
|||||||||| |||||||||| |||||||| ||||||||| ||| ||||||||||| |
Sbjct: 440 tgaacagcccnaatgagcccactcaaagtccaagttttcttctgcncccaaattgatcgt 381
Query: 788 gcactc-ata--ccaaaggtggcctctgcataga---tagtgccat-cattt-gcccaac 839
|||||| ||| | ||||||| |||||||||| | ||||||||| ||||| |||||||
Sbjct: 380 gcactcaataaccaaaaggtgccctctgcataaagattagtgccatccatttcgcccaac 321
Query: 840 tgacttta--gagaaagactcaa 860
|||||||| |||||||||||||
Sbjct: 320 tgactttagggagaaagactcaa 298