Miyakogusa Predicted Gene
- Lj2g3v0435530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0435530.1 Non Chatacterized Hit- tr|C4JAB5|C4JAB5_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,31.12,1e-18,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; LIM_bind,NULL;
seg,NULL,NODE_8064_length_1370_cov_248.719711.path1.1
(1308 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70098 weakly similar to UniRef100_Q6H974 Cluster: SEU... 797 0.0
gnl|LJGI|BW626060 homologue to UniRef100_A7QVK1 Cluster: Chromos... 662 0.0
gnl|LJGI|BP085380 212 4e-54
gnl|LJGI|TC74521 similar to UniRef100_A7QVK1 Cluster: Chromosome... 84 3e-15
>gnl|LJGI|TC70098 weakly similar to UniRef100_Q6H974 Cluster: SEU1 protein; n=1;
Antirrhinum majus|Rep: SEU1 protein - Antirrhinum majus
(Garden snapdragon), partial (7%)
Length = 748
Score = 797 bits (402), Expect = 0.0
Identities = 414/418 (99%)
Strand = Plus / Plus
Query: 891 acaacgctctctaagtgcaaatagcatactacagcaaggtcattcacagggctctcaggc 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaacgctctctaagtgcaaatagcatactacagcaaggtcattcacagggctctcaggc 60
Query: 951 aaaccaggctctgcaacagcagatgattcaacaactgctgcaggagatgtctcatagcaa 1010
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 61 aaaccaggctctgcaacagcaaatgattcaacaactgctgcaggagatgtctcatagcca 120
Query: 1011 tggagggatgcaacctcagtcccttggtggatccaatggaaatggtaacatggcaaagaa 1070
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 121 tggagggatgcaacctcagtcccttggtggatcccatggaaatggtaacatggccaagaa 180
Query: 1071 tggtggggtgggctttggtggccagactctacgcgtagctggagatacttctaatgtttc 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtggggtgggctttggtggccagactctacgcgtagctggagatacttctaatgtttc 240
Query: 1131 tggaagtaatggacctgtacctagccggagcaacagcttcaaagccgcttcgaacagtga 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggaagtaatggacctgtacctagccggagcaacagcttcaaagccgcttcgaacagtga 300
Query: 1191 ttcttctgcagctggtggcaacaatggatttaaccagagaacatctgacatgccacaaaa 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcttctgcagctggtggcaacaatggatttaaccagagaacatctgacatgccacaaaa 360
Query: 1251 tctccatttgccagaagatgtggatattggcaatgatttcatggatagtagttttttc 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctccatttgccagaagatgtggatattggcaatgatttcatggatagtagttttttc 418
>gnl|LJGI|BW626060 homologue to UniRef100_A7QVK1 Cluster: Chromosome chr16
scaffold_189, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_189, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 487
Score = 662 bits (334), Expect = 0.0
Identities = 334/334 (100%)
Strand = Plus / Plus
Query: 1 atgttagaatatgccaaagcagttcaagagagtgtgtacgagcagcttcgtgttgttcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atgttagaatatgccaaagcagttcaagagagtgtgtacgagcagcttcgtgttgttcgt 213
Query: 61 gagggtcaactccgtatcatattcacgcaagatctgaagatattatcgtgggagttttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gagggtcaactccgtatcatattcacgcaagatctgaagatattatcgtgggagttttgt 273
Query: 121 gcaaggcgccatgaagaactccttcctcgaaggttggttgcaccgcaggtaaaccagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcaaggcgccatgaagaactccttcctcgaaggttggttgcaccgcaggtaaaccagttg 333
Query: 181 gttcaagtagcacaaaaatgccaaagtacaattgctgagagtggatctgatgggatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gttcaagtagcacaaaaatgccaaagtacaattgctgagagtggatctgatgggatttct 393
Query: 241 cagcaggatttgcaaacaaacagcaatatggtattgactgctgggcgtcatcttgcgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cagcaggatttgcaaacaaacagcaatatggtattgactgctgggcgtcatcttgcgaag 453
Query: 301 agtttggagttgcagtcactaaatgacttaggtt 334
||||||||||||||||||||||||||||||||||
Sbjct: 454 agtttggagttgcagtcactaaatgacttaggtt 487
>gnl|LJGI|BP085380
Length = 453
Score = 212 bits (107), Expect = 4e-54
Identities = 223/245 (91%), Gaps = 14/245 (5%)
Strand = Plus / Minus
Query: 1066 aagaatggtggggtgggctttggtggccagactctacgcgtagctggagatacttctaat 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aagaatggtggggtgggctttggtggccagactctacgcgtagctggagatacttctaat 392
Query: 1126 gtttctggaagtaatggacctgtacctag-ccggag-caacagcttcaaagccgct-tcg 1182
||||||||||||||||||||||||||||| |||||| || ||||||| |||||||| |||
Sbjct: 391 gtttctggaagtaatggacctgtacctagnccggagccaccagcttccaagccgctgtcg 332
Query: 1183 aa-cagtgattcttctg-cagctggtgg-caacaatggatttaacca-gagaacatctg- 1237
|| |||||||||||||| |||||||||| | || |||||||||||| |||||| ||||
Sbjct: 331 aaccagtgattcttctgccagctggtggcccaccatggatttaaccncgagaacctctgc 272
Query: 1238 acatg-ccacaaaatct-ccatttg-ccagaaga-tgtggatatt--ggcaatgatttca 1291
||||| || |||||||| ||||||| |||||||| |||||||||| | |||||||||||
Sbjct: 271 acatgcccccaaaatctcccatttgcccagaagagtgtggatattgcgccaatgatttca 212
Query: 1292 tggat 1296
|||||
Sbjct: 211 tggat 207
>gnl|LJGI|TC74521 similar to UniRef100_A7QVK1 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 1086
Score = 83.8 bits (42), Expect = 3e-15
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1165 agcttcaaagccgcttcgaacagtgattcttctgcagctggtggcaacaatggatttaac 1224
||||||||||| ||||| | ||||||||||| ||| ||||| ||||||||||| || |||
Sbjct: 650 agcttcaaagcagcttcaagcagtgattcttatgccgctggaggcaacaatgggttcaac 709
Query: 1225 cagagaacatctga 1238
||||||||||||||
Sbjct: 710 cagagaacatctga 723
Score = 63.9 bits (32), Expect = 2e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 500 tggaacaactagccaatgttcaaggtctgcctactgatcgaaatacactgaataag 555
||||||||||||| || |||||||||||||| |||||||| || ||||| ||||||
Sbjct: 21 tggaacaactagcaaacgttcaaggtctgccaactgatcgtaacacacttaataag 76
Score = 58.0 bits (29), Expect = 1e-07
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 661 aactaccagaatattctcatgaggcaaaactcgatgaattcaaactctggttcgcttcag 720
|||||||||||| | | |||||||||||||||||||| |||| | |||| || ||||||
Sbjct: 182 aactaccagaatcatataatgaggcaaaactcgatgaactcaagccctggctcacttcag 241
Query: 721 cgagaagga 729
| |||||||
Sbjct: 242 caagaagga 250