Miyakogusa Predicted Gene
- Lj2g3v0435510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0435510.1 Non Chatacterized Hit- tr|B9SKW2|B9SKW2_RICCO
Transcriptional corepressor SEUSS, putative
OS=Ricinus,39.81,8e-17,seg,NULL; LIM_bind,NULL; coiled-coil,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_30231_length_1557_cov_207.021194.path1.1
(1203 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75146 similar to UniRef100_A7QVK1 Cluster: Chromosome... 468 e-131
gnl|LJGI|AV406571 similar to UniRef100_Q6H974 Cluster: SEU1 prot... 305 3e-82
gnl|LJGI|TC71879 similar to UniRef100_A7QVK1 Cluster: Chromosome... 252 4e-66
gnl|LJGI|BW626060 homologue to UniRef100_A7QVK1 Cluster: Chromos... 139 5e-32
>gnl|LJGI|TC75146 similar to UniRef100_A7QVK1 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 593
Score = 468 bits (236), Expect = e-131
Identities = 241/243 (99%)
Strand = Plus / Plus
Query: 1 atgacatcttctcgggtggctggaggattaacacactcatcatcaagttctggcatattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgacatcttctcgggtggctggaggattaacacactcatcatcaagttctggcatattc 410
Query: 61 tttcagggagatgggcagtcacagaatgcagttaactctcacttgagctcatcttatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tttcagggagatgggcagtcacagaatgcagttaactctcacttgagctcatcttatggt 470
Query: 121 aactcatctaactcgattcctggaactgggcgttcaaatctgggtctggtctctggggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aactcatctaactcgattcctggaactgggcgttcaaatctgggtctggtctctggggat 530
Query: 181 atgagtaatgctgttttaaacagtgtgacaaactcagcaccaagtgttggagccagttct 240
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 531 atgagtaatgctgttttaaacagtgtgacaaactcagcacncagtgttggagccagttct 590
Query: 241 cta 243
|||
Sbjct: 591 cta 593
>gnl|LJGI|AV406571 similar to UniRef100_Q6H974 Cluster: SEU1 protein; n=1; Antirrhinum
majus|Rep: SEU1 protein - Antirrhinum majus (Garden
snapdragon), partial (7%)
Length = 178
Score = 305 bits (154), Expect = 3e-82
Identities = 172/178 (96%)
Strand = Plus / Plus
Query: 893 caaagcgcccatatgacagtggtgtttgtgcccgtcgactgatgcaatacctttatcatc 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaagcgcccatatgacagtggtgtttgtgcccgtcgactgatgcaatacctttatcatc 60
Query: 953 aaagacaacgaccaagtgataatagtatagcctattggagaaaatttgtggctgaatatt 1012
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 61 aaagacaacgaccaagtgataatagtatagcctatgggagaagatttgtggctgaatatt 120
Query: 1013 actcacctcgtgcaaagaaacggtggtgcttgtcattatatgataatgttggtcatca 1070
||||||||||||| |||||||||||||| || |||||||||||||||||||||||||
Sbjct: 121 actcacctcgtgcgaagaaacggtggtgggtggcattatatgataatgttggtcatca 178
>gnl|LJGI|TC71879 similar to UniRef100_A7QVK1 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 693
Score = 252 bits (127), Expect = 4e-66
Identities = 266/311 (85%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 8 cttctcgggtggctggaggattaacacactcatcatcaagttctggcatattctttcagg 67
|||||||||||||||| || ||||| || ||||| ||||| ||||| || |||||||| |
Sbjct: 334 cttctcgggtggctggggggttaacccaatcatcgtcaagatctggaattttctttcaag 393
Query: 68 gagatgggcagtcacagaatgcagttaactctcacttgagctcatcttatggtaactcat 127
|||| |||||||||||||||| ||||||||||||||| ||||| ||| || ||||||||
Sbjct: 394 gagacgggcagtcacagaatgtagttaactctcacttaagctcgccttttgttaactcat 453
Query: 128 ctaactcgattcctggaactgggcgttcaaatctgggtctggtctctggggatatgagta 187
||||| ||||||||| ||||||||| || ||||||||||| ||| ||||||||| ||
Sbjct: 454 ctaacatagttcctggaaatgggcgttcgaacctgggtctggtttctagggatatgaata 513
Query: 188 atgctgttttaaacagtgtgacaaactcagcaccaagtgttggagccagttctctagtta 247
|||| ||||| ||||||||| ||||||| ||||||||||||||||||| |||| | || |
Sbjct: 514 atgcagttttgaacagtgtggcaaactcggcaccaagtgttggagccaattctatggtca 573
Query: 248 cagatgccaattctgcactttctggggggcccaatttgcagagaagtgcaagctttaaca 307
|||||| ||||| ||||| ||| || ||||| | ||||||||||||||||||||||||
Sbjct: 574 cagatggaaattccgcactctct-ggtggccccacatgcagagaagtgcaagctttaaca 632
Query: 308 ctgagtcatac 318
| || ||||||
Sbjct: 633 cagactcatac 643
>gnl|LJGI|BW626060 homologue to UniRef100_A7QVK1 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 487
Score = 139 bits (70), Expect = 5e-32
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1126 ggttctaaatctggaaagggatttgaggcaacttctgaagttctccctagacttaatgaa 1185
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 13 ggttctaaatctggaaagggatttgaggcaccttttgaagttctccctagacttaatgaa 72
Query: 1186 atcaaatttggaagtggt 1203
||||||||||||||||||
Sbjct: 73 atcaaatttggaagtggt 90