Miyakogusa Predicted Gene
- Lj2g3v0371730.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0371730.1 tr|I0Z3C5|I0Z3C5_9CHLO 60S ribosomal protein L36
OS=Coccomyxa subellipsoidea C-169 PE=3
SV=1,74.63,2e-19,RIBOSOMAL_L36E,Ribosomal protein L36e; 60S RIBOSOMAL
PROTEIN L36,Ribosomal protein L36e; Ribosomal_L,CUFF.34543.1
(349 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65935 homologue to UniRef100_A5ATP3 Cluster: 60S ribo... 400 e-111
gnl|LJGI|TC69312 similar to UniRef100_Q5I7L5 Cluster: 60S riboso... 266 8e-71
gnl|LJGI|TC75495 homologue to UniRef100_Q5I7L5 Cluster: 60S ribo... 252 1e-66
gnl|LJGI|TC65085 similar to UniRef100_Q5I7L5 Cluster: 60S riboso... 250 5e-66
>gnl|LJGI|TC65935 homologue to UniRef100_A5ATP3 Cluster: 60S ribosomal protein L36;
n=1; Vitis vinifera|Rep: 60S ribosomal protein L36 -
Vitis vinifera (Grape), complete
Length = 610
Score = 400 bits (202), Expect = e-111
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 42 gaaaacaagcaaaagggtgcactttgtaaggagcctcatccgtgaagttgctgggtttgc 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gaaaacaagcaaaagggtgcactttgtaaggagcctcatccgtgaagttgctgggtttgc 192
Query: 102 accttatgagaagcgtataactgagttgctgaaggttggaaaagataagagggcacttaa 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 accttatgagaagcgtataactgagttgctgaaggttggaaaagataagagggcacttaa 252
Query: 162 agttgccaagagaaagctcggaactcacaaacgcgcaaagcgaaagcgtgaggagatgtc 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agttgccaagagaaagctcggaactcacaaacgcgcaaagcgaaagcgtgaggagatgtc 312
Query: 222 caatgttctccgaaagatgagg 243
||||||||||||||||||||||
Sbjct: 313 caatgttctccgaaagatgagg 334
>gnl|LJGI|TC69312 similar to UniRef100_Q5I7L5 Cluster: 60S ribosomal protein L36;
n=1; Triticum aestivum|Rep: 60S ribosomal protein L36 -
Triticum aestivum (Wheat), complete
Length = 624
Score = 266 bits (134), Expect = 8e-71
Identities = 185/202 (91%)
Strand = Plus / Plus
Query: 43 aaaacaagcaaaagggtgcactttgtaaggagcctcatccgtgaagttgctgggtttgca 102
||||| ||||| |||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 166 aaaaccagcaagagggtgcactttgtgagaagcctcatccgtgaggttgctgggtttgct 225
Query: 103 ccttatgagaagcgtataactgagttgctgaaggttggaaaagataagagggcacttaaa 162
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 226 ccttatgagaagcgtatcactgagttgctcaaggttggaaaagacaagagggcactcaag 285
Query: 163 gttgccaagagaaagctcggaactcacaaacgcgcaaagcgaaagcgtgaggagatgtcc 222
||||| ||| ||||||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 286 gttgcaaagcgaaagctaggaacccacaagcgtgcaaagcgaaagcgtgaggagatgtcc 345
Query: 223 aatgttctccgaaagatgaggt 244
||||||||||||||||||||||
Sbjct: 346 aatgttctccgaaagatgaggt 367
>gnl|LJGI|TC75495 homologue to UniRef100_Q5I7L5 Cluster: 60S ribosomal protein L36;
n=1; Triticum aestivum|Rep: 60S ribosomal protein L36 -
Triticum aestivum (Wheat), partial (64%)
Length = 453
Score = 252 bits (127), Expect = 1e-66
Identities = 172/187 (91%)
Strand = Plus / Plus
Query: 58 gtgcactttgtaaggagcctcatccgtgaagttgctgggtttgcaccttatgagaagcgt 117
||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 87 gtgcactttgtgagaagcctcatccgtgaggttgctgggtttgctccttatgagaagcgt 146
Query: 118 ataactgagttgctgaaggttggaaaagataagagggcacttaaagttgccaagagaaag 177
|| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||| |||||
Sbjct: 147 atcactgagttgctcaaggttggaaaagacaagagggcactcaaggttgcaaagcgaaag 206
Query: 178 ctcggaactcacaaacgcgcaaagcgaaagcgtgaggagatgtccaatgttctccgaaag 237
|| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ctaggaacccacaagcgtgcaaagcgaaagcgtgaggagatgtccaatgttctccgaaag 266
Query: 238 atgaggt 244
|||||||
Sbjct: 267 atgaggt 273
>gnl|LJGI|TC65085 similar to UniRef100_Q5I7L5 Cluster: 60S ribosomal protein L36;
n=1; Triticum aestivum|Rep: 60S ribosomal protein L36 -
Triticum aestivum (Wheat), complete
Length = 685
Score = 250 bits (126), Expect = 5e-66
Identities = 183/202 (90%)
Strand = Plus / Plus
Query: 43 aaaacaagcaaaagggtgcactttgtaaggagcctcatccgtgaagttgctgggtttgca 102
||||| ||||| || ||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 161 aaaaccagcaagagagtgcactttgtgagaagcctcatccgtgaggttgctgggtttgct 220
Query: 103 ccttatgagaagcgtataactgagttgctgaaggttggaaaagataagagggcacttaaa 162
||||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||| ||
Sbjct: 221 ccttatgagaagcgtatcactgagttgctcaaggttggaaaagacaagagggtactcaag 280
Query: 163 gttgccaagagaaagctcggaactcacaaacgcgcaaagcgaaagcgtgaggagatgtcc 222
||||| ||| ||||||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 281 gttgcaaagcgaaagctaggaacccacaagcgtgcaaagcgaaagcgtgaggagatgtcc 340
Query: 223 aatgttctccgaaagatgaggt 244
||||||||||||||||||||||
Sbjct: 341 aatgttctccgaaagatgaggt 362