Miyakogusa Predicted Gene
- Lj2g3v0371710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0371710.1 Non Chatacterized Hit- tr|D8SSA7|D8SSA7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.67,1e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptide repeat
domain,P,CUFF.34539.1
(1039 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76582 similar to UniRef100_A7P8U5 Cluster: Chromosome... 2030 0.0
gnl|LJGI|TC82344 similar to UniRef100_A7P8U5 Cluster: Chromosome... 1005 0.0
>gnl|LJGI|TC76582 similar to UniRef100_A7P8U5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (61%)
Length = 1203
Score = 2030 bits (1024), Expect = 0.0
Identities = 1037/1040 (99%), Gaps = 1/1040 (0%)
Strand = Plus / Plus
Query: 1 atgccagcattgctaggacgggttcataagcctgtatcctcctctcagattgataggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgccagcattgctaggacgggttcataagcctgtatcctcctctcagattgataggctt 123
Query: 61 gtttcctttttaaattccaaacgaccatggactgtacgccattttagcaaacaacttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gtttcctttttaaattccaaacgaccatggactgtacgccattttagcaaacaacttgtc 183
Query: 121 ggagaatcagatgacgtttctattcagaactcagacccaaattttagtgacagaagaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggagaatcagatgacgtttctattcagaactcagacccaaattttagtgacagaagaagc 243
Query: 181 cgcggaggatcagaaccaattccaagtacaaagccagttaatcagcgtacccgagaatat 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cgcgaaggatcagaaccaattccaagtacaaagccagttaatcagcgtacccgagaatat 303
Query: 241 aatagaggttctcgttcaagattcgatggcaaccgtgatgaagtggaaaagacaacaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aatagaggttctcgttcaagattcgatggcaaccgtgatgaagtggaaaagacaacaatg 363
Query: 301 aaatctgatcttggatttcagggccgaaataggccggacgttgccaatcaattaggagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aaatctgatcttggatttcagggccgaaataggccggacgttgccaatcaattaggagac 423
Query: 361 agtttccttgataagttcaagcttggttttgataataaagcagggaattcctcagaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agtttccttgataagttcaagcttggttttgataataaagcagggaattcctcagaaacc 483
Query: 421 aaccaatctgaagaggcgacaaagagttcaaattccaatcaaccagctatgcctgaggac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aaccaatctgaagaggcgacaaagagttcaaattccaatcaaccagctatgcctgaggac 543
Query: 481 gctgatgaaatcttcaagaagatgaaggaaactggtcttatccccaatgcggtggctatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gctgatgaaatcttcaagaagatgaaggaaactggtcttatccccaatgcggtggctatg 603
Query: 541 cttgatggtctatgtaaagatggtcttgttcaagaagcattgaaactttttggtttgatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cttgatggtctatgtaaagatggtcttgttcaagaagcattgaaactttttggtttgatg 663
Query: 601 agagaaaagggaaccattccagagattgtcatttacaccgctgtggttgagggctacaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 agagaaaagggaaccattccagagattgtcatttacaccgctgtggttgagggctacaca 723
Query: 661 aaggcccacaaggctgatgatgccaaaaggattttcaggaaaatgcagagcaatggaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aaggcccacaaggctgatgatgccaaaaggattttcaggaaaatgcagagcaatggaatt 783
Query: 721 tcacccaatgctttcagttacaccgtccttgtacaaggactctgcaaatgtagcagatta 780
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 784 tcacccaatgctttcagttacaccgtccttgtacgaggactctgcaaatgtagcagatta 843
Query: 781 caggatgcttttgaattttgtgtagagatgttagaagctggtcattctccaaatgtcaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 caggatgcttttgaattttgtgtagagatgttagaagctggtcattctccaaatgtcaca 903
Query: 841 actttcgttgaccttgtagaaggtttctgcaaggaacaagggattgaagaagcaaagggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 actttcgttgaccttgtagaaggtttctgcaaggaacaagggattgaagaagcaaagggt 963
Query: 901 gctatcaaaacattaatagaaaagggttttgctgtgaatgagaaagctgttaaggacttt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 gctatcaaaacattaatagaaaagggttttgctgtgaatgagaaagctgttaaggacttt 1023
Query: 961 ttgaacaag-aaaaaaccattttcaccctccgtctgggaggctatctttgggaagaaagc 1019
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 ttgaacaagaaaaaaaccattttcaccctccgtctgggaggctatctttgggaagaaagc 1083
Query: 1020 cccacagatgccattttaaa 1039
||||||||||||||||||||
Sbjct: 1084 cccacagatgccattttaaa 1103
>gnl|LJGI|TC82344 similar to UniRef100_A7P8U5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (67%)
Length = 1370
Score = 1005 bits (507), Expect = 0.0
Identities = 649/697 (93%), Gaps = 12/697 (1%)
Strand = Plus / Plus
Query: 352 ttaggagacagtttccttgataagttcaagcttggttttgataataaagcagggaattcc 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttaggagacagtttccttgataagttcaagcttggttttgataataaagcagggaattcc 640
Query: 412 tcaga---------aaccaaccaatctgaagaggcgacaaagagttcaaattccaatcaa 462
|| || || ||||| |||||||||||| | |||| ||||||||||||||
Sbjct: 641 tcggaggttgcagcaagcaacctatctgaagaggcta---agagcgcaaattccaatcaa 697
Query: 463 ccagctatgcctgaggacgctgatgaaatcttcaagaagatgaaggaaactggtcttatc 522
||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 698 ccagctatgcctgaggatgccgatgaaattttcaagaagatgaaggaaactggtcttatc 757
Query: 523 cccaatgcggtggctatgcttgatggtctatgtaaagatggtcttgttcaagaagcattg 582
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 758 cccaatgcggtggctatgcttgatggtctatgtaaagatggtcttgttcaagaagccttg 817
Query: 583 aaactttttggtttgatgagagaaaagggaaccattccagagattgtcatttacaccgct 642
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 aagctttttggtttgatgagagaaaagggaaccattccagagattgtcatttacaccgct 877
Query: 643 gtggttgagggctacacaaaggcccacaaggctgatgatgccaaaaggattttcaggaaa 702
||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 878 gtggtggagggctacactaaggctcacaaggctgatgatgccaaaaggattttcaggaaa 937
Query: 703 atgcagagcaatggaatttcacccaatgctttcagttacaccgtccttgtacaaggactc 762
|||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 938 atgcagagtaatggaatttcacccaatgctttcagttacacggttcttgtacaaggactc 997
Query: 763 tgcaaatgtagcagattacaggatgcttttgaattttgtgtagagatgttagaagctggt 822
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 998 tgcaaatgtagtagattacaggatgcttttgaattttgtgtggagatgttagaagctggt 1057
Query: 823 cattctccaaatgtcacaactttcgttgaccttgtagaaggtttctgcaaggaacaaggg 882
|||||||||||| | ||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 1058 cattctccaaatatgacaactttcgttgaccttgtagatggtttcgtcaaggaacaaggg 1117
Query: 883 attgaagaagcaaagggtgctatcaaaacattaatagaaaagggttttgctgtgaatgag 942
||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 1118 gttgcagaagcaaagggtgctatcagaacattaatagaaaagggttttgttgttaatgag 1177
Query: 943 aaagctgttaaggactttttgaacaagaaaaaaccattttcaccctccgtctgggaggct 1002
||||||||||||| || ||| ||| ||||||||||||||||||||| || |||||||||
Sbjct: 1178 aaagctgttaaggggttcttggacatgaaaaaaccattttcaccctctgtttgggaggct 1237
Query: 1003 atctttgggaagaaagccccacagatgccattttaaa 1039
|||||||||||||||||||||||||||||||||||||
Sbjct: 1238 atctttgggaagaaagccccacagatgccattttaaa 1274
Score = 99.6 bits (50), Expect = 3e-20
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 1 atgccagcattgctaggacgggttcataagcctgtatcctcctctcagattgataggctt 60
||||| ||||||||| |||||||||||||||||||||||||||||||||| || |||||
Sbjct: 164 atgcctgcattgctaagacgggttcataagcctgtatcctcctctcagatggaaaggcta 223
Query: 61 gtttcctttttaaattccaaac 82
||||| |||||||||| ||||
Sbjct: 224 gtttctcttttaaattcgaaac 245
Score = 71.9 bits (36), Expect = 8e-12
Identities = 83/98 (84%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 108 caaacaacttgtcggagaatcagatgacgtttctattcagaactcagacccaaattttag 167
|||||||||| | |||||||| ||||| ||||||||||| || | ||||||| |||||||
Sbjct: 292 caaacaacttatgggagaatctgatgatgtttctattcataagttagacccacattttag 351
Query: 168 tgacagaagaagccgcggaggatcagaaccaattccaa 205
||| || ||||| | ||||||||||||||||||||
Sbjct: 352 tga---tagtagccgggaaggatcagaaccaattccaa 386
Score = 52.0 bits (26), Expect = 7e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 212 agccagttaatcagcgtacccgagaatataatagaggttctcgttc 257
|||||||||||| || || |||||||| |||||||||||||||||
Sbjct: 408 agccagttaatccgcatagtcgagaatacaatagaggttctcgttc 453