Miyakogusa Predicted Gene

Lj2g3v0346240.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0346240.1 tr|G7IES4|G7IES4_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_1g100820 PE=4
S,71.82,0,coiled-coil,NULL;
Pkinase_Tyr,Serine-threonine/tyrosine-protein kinase catalytic domain;
U-box,U box,NODE_50157_length_2594_cov_28.721279.path2.1
         (1995 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595075                                                     910   0.0  
gnl|LJGI|BP084881 homologue to UniRef100_Q2HTK4 Cluster: Protein...    82   2e-14
gnl|LJGI|FS336025 weakly similar to UniRef100_A7QG26 Cluster: Ch...    66   9e-10
gnl|LJGI|AV777883                                                      58   2e-07

>gnl|LJGI|BW595075 
          Length = 480

 Score =  910 bits (459), Expect = 0.0
 Identities = 476/482 (98%), Gaps = 6/482 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgggagcagcagcagacaagtataagttgggggtttggaattgcagtaaggtggctgagc 61
           ||||||||||||||||||||||||||      ||||||||||||||||||||||||||||
Sbjct: 5   tgggagcagcagcagacaagtataag------gtttggaattgcagtaaggtggctgagc 58

                                                                       
Query: 62  aagtgtcagagaaagctattattgtacctgagcaatcgctatcctgcaatgttttgttca 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59  aagtgtcagagaaagctattattgtacctgagcaatcgctatcctgcaatgttttgttca 118

                                                                       
Query: 122 tctacaagggaaacctcataagtactagggtagatattaaacatacatctgaaattgaga 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tctacaagggaaacctcataagtactagggtagatattaaacatacatctgaaattgaga 178

                                                                       
Query: 182 ctgcccctgcattgttggtgctcaattcaaatacagaaatcaagcaatcagaaaacatta 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ctgcccctgcattgttggtgctcaattcaaatacagaaatcaagcaatcagaaaacatta 238

                                                                       
Query: 242 aatcagaatctagatctgatgccttgaaatattcagattctgatgatacgaaggagattg 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aatcagaatctagatctgatgccttgaaatattcagattctgatgatacgaaggagattg 298

                                                                       
Query: 302 aaaatggtagttcccactgttcattaaatgcaaaatggccctttaatagtgctactgaca 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaaatggtagttcccactgttcattaaatgcaaaatggccctttaatagtgctactgaca 358

                                                                       
Query: 362 ggtcaaattcaacagattttctgctttatgaggaggaagaagatgaaagggaacaagcaa 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ggtcaaattcaacagattttctgctttatgaggaggaagaagatgaaagggaacaagcaa 418

                                                                       
Query: 422 atgaattaaatggtagcctggaaaaaaccatcatacattctaaaagcatgagacgaaaaa 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atgaattaaatggtagcctggaaaaaaccatcatacattctaaaagcatgagacgaaaaa 478

             
Query: 482 ga 483
           ||
Sbjct: 479 ga 480


>gnl|LJGI|BP084881 homologue to UniRef100_Q2HTK4 Cluster: Protein kinase; U box; n=1;
            Medicago truncatula|Rep: Protein kinase; U box - Medicago
            truncatula (Barrel medic), partial (10%)
          Length = 488

 Score = 81.8 bits (41), Expect = 2e-14
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                        
Query: 1811 tccaggaagtcatggaagatccttacatagctgcagatggctttacatatgaagcagagg 1870
            ||||||||||||||  ||||||  |  ||||||||||||| || || |||||||| ||||
Sbjct: 401  tccaggaagtcatgcgagatccacatgtagctgcagatggtttcacttatgaagctgagg 342

                                                             
Query: 1871 caatacaaggatggttgaacagtggtcatgacacttcccccatgacaaa 1919
            | |||| ||||||| |  ||||||||||||||||||| || ||||||||
Sbjct: 341  ctatacgaggatggcttgacagtggtcatgacacttcaccaatgacaaa 293


>gnl|LJGI|FS336025 weakly similar to UniRef100_A7QG26 Cluster: Chromosome undetermined
           scaffold_91, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_91, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (6%)
          Length = 636

 Score = 65.9 bits (33), Expect = 9e-10
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 1   atgggagcagcagcagacaagtataagttgggg 33
           |||||||||||||||||||||||||||||||||
Sbjct: 468 atgggagcagcagcagacaagtataagttgggg 500


>gnl|LJGI|AV777883 
          Length = 402

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 1963 cacaatgccattcaggagtggcaggaacagtga 1995
            |||||||||||||||||||||||| ||||||||
Sbjct: 402  cacaatgccattcaggagtggcagcaacagtga 370