Miyakogusa Predicted Gene
- Lj2g3v0343930.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0343930.2 Non Chatacterized Hit- tr|F6H6K5|F6H6K5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,73.48,0,GDHRDH,Glucose/ribitol dehydrogenase;
SDRFAMILY,Short-chain dehydrogenase/reductase SDR; no
descript,CUFF.34509.2
(954 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71403 similar to UniRef100_Q6RVV4 Cluster: Short-chai... 365 e-100
gnl|LJGI|BP066875 similar to UniRef100_A7QG32 Cluster: Chromosom... 212 3e-54
gnl|LJGI|TC65110 similar to UniRef100_A7QG32 Cluster: Chromosome... 212 3e-54
gnl|LJGI|TC58101 similar to UniRef100_A7QIY1 Cluster: Chromosome... 92 8e-18
gnl|LJGI|DC597372 similar to UniRef100_Q6RVV4 Cluster: Short-cha... 56 4e-07
>gnl|LJGI|TC71403 similar to UniRef100_Q6RVV4 Cluster: Short-chain dehydrogenase
Tic32; n=1; Pisum sativum|Rep: Short-chain dehydrogenase
Tic32 - Pisum sativum (Garden pea), partial (98%)
Length = 1348
Score = 365 bits (184), Expect = e-100
Identities = 548/668 (82%), Gaps = 6/668 (0%)
Strand = Plus / Plus
Query: 26 cttctgggttttcatcatcttccacagctgaggatgttactcatggaatcgatgggaatg 85
|||||||||| || ||||||||||||||||| | || ||||| ||||||||||| | ||
Sbjct: 114 cttctgggttctcttcatcttccacagctgaacaagtcactcaaggaatcgatggcactg 173
Query: 86 gtctcgttgctattgttacaggggctaccagtggtattggtgctgagactacccgtgttc 145
| ||| ||| |||| ||||| || |||| ||||| || |||||||||| |||||||
Sbjct: 174 gcctcactgccgttgtcacaggagcatccagcggtatcggcactgagactacacgtgttc 233
Query: 146 ttgcttcgcatggtgtccatgtgattatgggggtgagaaatatgattgttgcacaagatg 205
||||| || ||||||||||||||||||||| |||||||||| || || ||||||
Sbjct: 234 ttgctaagcgtggtgtccatgtgattatgggcgtgagaaatacagctgctggtaaagatg 293
Query: 206 tcaaagatgcaatacttaagaagattcccacagctaaagttgatgccattgagttagacc 265
||||||| ||||||||||| ||| |||| | ||||||||||||||||| ||||| || |
Sbjct: 294 tcaaagaaacaatacttaaggagaatccctctgctaaagttgatgccatggagttggatc 353
Query: 266 ttagctcaatcgcatctgttcagaatttcgcatcagagttcaattcctctggtcttccac 325
| || ||||| | ||||| |||| || |||||||||| || |||||||||||||||
Sbjct: 354 tcagttcaatggagtctgtcaagaagtttgcatcagagtataaatcctctggtcttccat 413
Query: 326 taaacattctgataaacaatgcaggtgttctggcaacccgtttcgcactgtccaaagaca 385
| |||||| ||||||||||||| || || ||||| || |||| || ||||||||||
Sbjct: 414 tgaacattttgataaacaatgctggaattatggcatgccctttcatgctatccaaagaca 473
Query: 386 acattgaactacactttgccacaaatcatataggtcattttctcttaacaaatcttctgt 445
|| |||||| || |||||||||||||| ||||||||||||| || ||||| ||| |||
Sbjct: 474 accatgaactgcagtttgccacaaatcacttaggtcattttctgttgacaaaccttttgt 533
Query: 446 tggatactatgaagaaaacagcacgcgaaagtaagaaagaggggagaattgttaatgtct 505
|||||||||||||||||||| | || |||||||||||||| || |||||||||| |||||
Sbjct: 534 tggatactatgaagaaaacatctcgtgaaagtaagaaagaaggaagaattgttattgtct 593
Query: 506 cctccgtcactcaccgatatg-----ttggc-ggaatcaattttgataaaatcaatgatc 559
|||| | ||||||||| || | || |||||| |||||| ||||| ||||| |
Sbjct: 594 cctcagaagctcaccgatttgcatattcggaaggaatccgttttgacaaaattaatgacc 653
Query: 560 aatcaagttactgcaggtggtttgcatatgggaaatcaaagcttgcaaacatattacatg 619
||||||||||| || ||| |||||||||| | ||||||||||| ||||| |||||||
Sbjct: 654 aatcaagttacaacaactggcgtgcatatgggcagtcaaagcttgctaacattttacatg 713
Query: 620 ccaatgaacttgcaagacatctcaaggaagaaggggtggatattactgctaattctcttg 679
||||||||||| ||| ||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 714 ccaatgaacttacaaaacatctcaaggaagacggggtggatattactgcaaactctcttc 773
Query: 680 atccagga 687
||||||||
Sbjct: 774 atccagga 781
Score = 75.8 bits (38), Expect = 4e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 888 tgatttggccaagaaactctgggatttcagcatgaatttgat 929
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 982 tgatttagccaagaaactctgggatttcagcatgaatttgat 1023
>gnl|LJGI|BP066875 similar to UniRef100_A7QG32 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 521
Score = 212 bits (107), Expect = 3e-54
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 atgtggccgttctgtagaaaaggggcttctgggttttcatcatcttccacagctgaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atgtggccgttctgtagaaaaggggcttctgggttttcatcatcttccacagctgaggat 452
Query: 61 gttactcatggaatcgatgggaatggtctcgttgctattgttacagg 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gttactcatggaatcgatgggaatggtctcgttgctattgttacagg 499
>gnl|LJGI|TC65110 similar to UniRef100_A7QG32 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 725
Score = 212 bits (107), Expect = 3e-54
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 atgtggccgttctgtagaaaaggggcttctgggttttcatcatcttccacagctgaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgtggccgttctgtagaaaaggggcttctgggttttcatcatcttccacagctgaggat 383
Query: 61 gttactcatggaatcgatgggaatggtctcgttgctattgttacagg 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttactcatggaatcgatgggaatggtctcgttgctattgttacagg 430
>gnl|LJGI|TC58101 similar to UniRef100_A7QIY1 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1852
Score = 91.7 bits (46), Expect = 8e-18
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 307 aattcctctggtcttccactaaacattctgataaacaatgcaggtgttctggcaacccgt 366
||||| ||||||||||| || || ||||| || ||||||||||| || ||||||| |
Sbjct: 337 aattcatctggtcttcctctcaatattcttattaacaatgcaggggtgatggcaactcca 396
Query: 367 ttcgcactgtccaaagacaacattgaactacactttgccacaaatcatataggtcatttt 426
||| || ||| |||||||||||||| | || ||||| || |||||| |||||||||||
Sbjct: 397 ttcatgctttcccaagacaacattgaattgcagtttgcaaccaatcatttaggtcatttt 456
Query: 427 ctcttaacaaatcttctgttggatactatgaagaaaac 464
||||| ||||| |||||||| || |||||||| |||||
Sbjct: 457 ctcttgacaaaccttctgttagaaactatgaaaaaaac 494
Score = 69.9 bits (35), Expect = 3e-11
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 540 ttttgataaaatcaatgatcaatcaagttactgcaggtggtttgcatatgggaaatcaaa 599
||||||||| ||||||||| ||||| | ||| |||| | ||||| ||||| |||||||
Sbjct: 576 ttttgataagatcaatgatgaatcaggatacagcagttattttgcttatggacaatcaaa 635
Query: 600 gcttgcaaacatattacatgccaatgaacttgcaagacatctcaaggaagaaggggtgga 659
|||||| || || || ||||| ||||| |||||||| | | | ||||||||||| |||||
Sbjct: 636 gcttgctaatattttgcatgcaaatgagcttgcaaggcgtttgaaggaagaaggagtgga 695
Query: 660 tat 662
|||
Sbjct: 696 tat 698
>gnl|LJGI|DC597372 similar to UniRef100_Q6RVV4 Cluster: Short-chain dehydrogenase
Tic32; n=1; Pisum sativum|Rep: Short-chain dehydrogenase
Tic32 - Pisum sativum (Garden pea), partial (9%)
Length = 440
Score = 56.0 bits (28), Expect = 4e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 644 aggaagaaggggtggatattactgctaattctcttgatccagga 687
||||||| ||||||||||||||||| || |||||| ||||||||
Sbjct: 8 aggaagacggggtggatattactgcaaactctcttcatccagga 51