Miyakogusa Predicted Gene
- Lj2g3v0343920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0343920.1 tr|A9S3M4|A9S3M4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_162641,38.97,7e-19, ,CUFF.34508.1
(441 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58379 weakly similar to UniRef100_A7Q1H5 Cluster: Chr... 874 0.0
gnl|LJGI|TC70191 similar to UniRef100_A3KQ56 Cluster: Hairy-rela... 70 1e-11
>gnl|LJGI|TC58379 weakly similar to UniRef100_A7Q1H5 Cluster: Chromosome chr7
scaffold_44, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (86%)
Length = 825
Score = 874 bits (441), Expect = 0.0
Identities = 441/441 (100%)
Strand = Plus / Plus
Query: 1 atggcggacaccacacaaggttcatcgtccttctgggatggctacaaagaattttggtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atggcggacaccacacaaggttcatcgtccttctgggatggctacaaagaattttggtca 176
Query: 61 cagaggtttgcctttctgggcaactattccaagtttgtgaagcgtgagaaacctgtccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cagaggtttgcctttctgggcaactattccaagtttgtgaagcgtgagaaacctgtccgt 236
Query: 121 tcctggtctagctctgatgttgaggagtttattgcttatgatccggttcacggacccgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tcctggtctagctctgatgttgaggagtttattgcttatgatccggttcacggacccgtc 296
Query: 181 ctgaaaactgctagagaagcagtgcaatatagtgtcgctggaagtgctttgggagcagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctgaaaactgctagagaagcagtgcaatatagtgtcgctggaagtgctttgggagcagta 356
Query: 241 gttactgcaggtgttgccttgaaatattcaaagagcttacatggtgctggactgtctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gttactgcaggtgttgccttgaaatattcaaagagcttacatggtgctggactgtctctt 416
Query: 301 ttagctggaggtatatttgggtggacatttgggcatgaggttgcaaatcatgcacttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttagctggaggtatatttgggtggacatttgggcatgaggttgcaaatcatgcacttcaa 476
Query: 361 ctttacagggtagacacattggctgctgaggctaagtttctggactggtggaaatttaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctttacagggtagacacattggctgctgaggctaagtttctggactggtggaaatttaag 536
Query: 421 actgaaggaagtgattaaagc 441
|||||||||||||||||||||
Sbjct: 537 actgaaggaagtgattaaagc 557
>gnl|LJGI|TC70191 similar to UniRef100_A3KQ56 Cluster: Hairy-related 1; n=1; Danio
rerio|Rep: Hairy-related 1 - Danio rerio (Zebrafish)
(Brachydanio rerio), partial (6%)
Length = 1430
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 315 atttgggtggacatttgggcatgaggttgcaaatcatgcacttcaactttacagg 369
|||| |||||||||||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 918 atttcggtggacatttgagcatgagattgcaaatcaaacacttcaactttacagg 972